LOC_Os07g20560 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os07g20560 T11802_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os07g20560.1 CCHC ZF 252 269

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

34 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK00840.1 Cannabis sativa PK00840.1 I 0.000
GRMZM2G467907 Zea mays GRMZM2G467907 I 0.000
GRMZM2G168163 Zea mays GRMZM2G168163 I 0.000
Sb02g026820 Sorghum bicolor Sb02g026820 I 0.000
LOC_Os09g28810 Oryza sativa LOC_Os09g28810 I 0.000
chr5.CM0089.1140.nc Lotus japonicus chr5.CM0089.1140.nc I 0.000
LOC_Os04g37690 Oryza sativa LOC_Os04g37690 N 0.000
LOC_Os02g35950 Oryza sativa LOC_Os02g35950 N 0.000
BRADI4G32380 Brachypodium distachyon BRADI4G32380 N 0.000
SB04G023540 Sorghum bicolor Sb04g023540 N 0.000
SB06G018280 Sorghum bicolor Sb06g018280 N 0.000
GRMZM2G069678 Zea mays GRMZM2G069678 N 0.000
BRADI3G46470 Brachypodium distachyon BRADI3G46470 N 0.000
BGIOSIBCE007488 Oryza indica BGIOSIBCE007488 N 0.000