LOC_Os06g11460 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os06g11460 T11571_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os06g11460.1 CCHC ZF 263 280

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

33 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os01g27550 Oryza sativa LOC_Os01g27550 N 0.889
LOC_Os01g61490 Oryza sativa LOC_Os01g61490 N 0.889
LOC_Os06g39920 Oryza sativa LOC_Os06g39920 N 0.889
LOC_Os04g32750 Oryza sativa LOC_Os04g32750 N 0.889
LOC_Os12g29900 Oryza sativa LOC_Os12g29900 N 0.889
LOC_Os02g10270 Oryza sativa LOC_Os02g10270 N 0.889
LOC_Os02g13750 Oryza sativa LOC_Os02g13750 N 0.889
LOC_Os03g32600 Oryza sativa LOC_Os03g32600 N 0.889
LOC_Os04g26290 Oryza sativa LOC_Os04g26290 N 0.889
LOC_Os02g34350 Oryza sativa LOC_Os02g34350 N 0.889
LOC_Os02g29260 Oryza sativa LOC_Os02g29260 N 0.889
LOC_Os12g22180 Oryza sativa LOC_Os12g22180 N 0.889
LOC_Os05g02270 Oryza sativa LOC_Os05g02270 N 0.889
LOC_Os09g07850 Oryza sativa LOC_Os09g07850 N 0.889
LOC_Os05g17540 Oryza sativa LOC_Os05g17540 N 0.889
LOC_Os07g23220 Oryza sativa LOC_Os07g23220 N 0.889
LOC_Os07g20560 Oryza sativa LOC_Os07g20560 N 0.889
LOC_Os05g19550 Oryza sativa LOC_Os05g19550 N 0.889
LOC_Os10g03070 Oryza sativa LOC_Os10g03070 N 0.889
LOC_Os10g13410 Oryza sativa LOC_Os10g13410 N 0.889
LOC_Os12g12450 Oryza sativa LOC_Os12g12450 N 0.889
LOC_Os05g13730 Oryza sativa LOC_Os05g13730 N 0.889
LOC_Os10g22230 Oryza sativa LOC_Os10g22230 N 0.889
LOC_Os10g20660 Oryza sativa LOC_Os10g20660 N 0.889
LOC_Os04g01439 Oryza sativa LOC_Os04g01439 N 0.833
LOC_Os12g37810 Oryza sativa LOC_Os12g37810 N 0.833
LOC_Os10g01600 Oryza sativa LOC_Os10g01600 N 0.833
LOC_Os07g19200 Oryza sativa LOC_Os07g19200 N 0.833
LOC_Os10g32124 Oryza sativa LOC_Os10g32124 N 0.833
LOC_Os12g15580 Oryza sativa LOC_Os12g15580 N 0.833
LOC_Os05g44870 Oryza sativa LOC_Os05g44870 N 0.833
LOC_Os02g45680 Oryza sativa LOC_Os02g45680 N 0.833
LOC_Os01g24400 Oryza sativa LOC_Os01g24400 N 0.778