CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Genemark.383_g
(
Serpula lacrymans
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Genemark.383_g
T15731_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Genemark.383_g
CCHC ZF
227
244
GNCYICGQEGHMSRDCRN
Links
Other
CCHC ZF
family RBPs
Other
Serpula lacrymans
RBPs
52 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NCLIV_056550
Neospora caninum
NCLIV_056550
I
0.000
TGVEG_097260
Toxoplasma gondii
TGVEG_097260
I
0.000
TGME49_113230
Toxoplasma gondii
TGME49_113230
I
0.000
TGGT1_089620
Toxoplasma gondii
TGGT1_089620
I
0.000
EDO07273.1
Babesia bovis
EDO07273.1
N
0.000
PY00093
Plasmodium yoelii
PY00093
N
0.000
PVX_081705
Plasmodium vivax
PVX_081705
N
0.000
PKH_021240
Plasmodium knowlesi
PKH_021240
N
0.000
PF07_0117
Plasmodium falciparum
PF07_0117
N
0.000
PCHAS_021050
Plasmodium chabaudi
PCHAS_021050
N
0.000
PBANKA_021210
Plasmodium berghei
PBANKA_021210
N
0.000
TA06015
Theileria annulata
TA06015
N
0.000