CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Genemark.6650_g
(
Serpula lacrymans
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Genemark.6650_g
T15767_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Genemark.6650_g
CCHC ZF
234
247
NCGQEGHMSRDCRN
Links
Other
CCHC ZF
family RBPs
Other
Serpula lacrymans
RBPs
27 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Genemark.8452_g
Serpula lacrymans
Genemark.8452_g
N
0.867
Genemark.688_g
Serpula lacrymans
Genemark.688_g
N
0.867
Genemark.12630_g
Serpula lacrymans
Genemark.12630_g
N
0.778
Genemark.11728_g
Serpula lacrymans
Genemark.11728_g
N
0.778
Genemark.12634_g
Serpula lacrymans
Genemark.12634_g
N
0.778
Genemark.4605_g
Serpula lacrymans
Genemark.4605_g
N
0.778
Genemark.291_g
Serpula lacrymans
Genemark.291_g
N
0.778
Genemark.1711_g
Serpula lacrymans
Genemark.1711_g
N
0.778
Genemark.10994_g
Serpula lacrymans
Genemark.10994_g
N
0.778
Genemark.114_g
Serpula lacrymans
Genemark.114_g
N
0.778
Genemark.697_g
Serpula lacrymans
Genemark.697_g
N
0.778
Genemark.8449_g
Serpula lacrymans
Genemark.8449_g
N
0.778
Genemark.7317_g
Serpula lacrymans
Genemark.7317_g
N
0.778
Genemark.10431_g
Serpula lacrymans
Genemark.10431_g
N
0.778
Genemark.7181_g
Serpula lacrymans
Genemark.7181_g
N
0.722
Genemark.2894_g
Serpula lacrymans
Genemark.2894_g
N
0.722
Genemark.383_g
Serpula lacrymans
Genemark.383_g
N
0.722
Genemark.10616_g
Serpula lacrymans
Genemark.10616_g
N
0.722
Genemark.4171_g
Serpula lacrymans
Genemark.4171_g
N
0.722
Genemark.2836_g
Serpula lacrymans
Genemark.2836_g
N
0.722
Genemark.2433_g
Serpula lacrymans
Genemark.2433_g
N
0.722
Genemark.11784_g
Serpula lacrymans
Genemark.11784_g
N
0.722
Genemark.983_g
Serpula lacrymans
Genemark.983_g
N
0.722
Genemark.9154_g
Serpula lacrymans
Genemark.9154_g
N
0.722
Genemark.10542_g
Serpula lacrymans
Genemark.10542_g
N
0.722
Genemark.10134_g
Serpula lacrymans
Genemark.10134_g
N
0.722
Genemark.2746_g
Serpula lacrymans
Genemark.2746_g
N
0.722