FXR1 (Monodelphis domestica)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 ENSMODG00000021294 T19114_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
FXR1
M152_0.6 		Homo sapiens AYGACR RNAcompete
Ray et al.(2013)
RNCMPT00161 		0.992
FXR2
M020_0.6 		Homo sapiens DGACRRR RNAcompete
Ray et al.(2013)
RNCMPT00020 		0.783
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000026620 KH 203 262
ENSMODP00000026620 KH 267 334
ENSMODP00000035589 KH 202 261
ENSMODP00000035589 KH 266 333
ENSMODP00000035590 KH 203 262
ENSMODP00000035590 KH 267 334

Links

Other KH family RBPs
Other Monodelphis domestica RBPs

95 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTTG_06752 Puccinia triticina PTTG_06752 N 0.000
fgenesh2_kg.2_#_607_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.2_#_607_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.4_#_2633_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.4_#_2633_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.4_#_790_#_0_0_FUV197G01ANJQY_CFPN Serpula lacrymans fgenesh2_kg.4_#_790_#_0_0_FUV197G01ANJQY_CFPN N 0.000
fgenesh2_kg.7_#_552_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.7_#_552_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.8_#_479_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.8_#_479_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.8_#_69_#_0_0_FUV197G01D0W21_CFPN Serpula lacrymans fgenesh2_kg.8_#_69_#_0_0_FUV197G01D0W21_CFPN N 0.000
fgenesh2_kg.8_#_974_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.8_#_974_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.9_#_1197_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.9_#_1197_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.9_#_1210_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.9_#_1210_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.9_#_308_#_0_0_FUV197G01ANJQY_CFPN Serpula lacrymans fgenesh2_kg.9_#_308_#_0_0_FUV197G01ANJQY_CFPN N 0.000
Genemark.4398_g Serpula lacrymans Genemark.4398_g N 0.000
Genemark.5345_g Serpula lacrymans Genemark.5345_g N 0.000
fgenesh2_kg.2_#_2345_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.2_#_2345_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.2_#_205_#_0_0_FUV197G01D0W21_CFPN Serpula lacrymans fgenesh2_kg.2_#_205_#_0_0_FUV197G01D0W21_CFPN N 0.000
fgenesh2_kg.2_#_1601_#_0_0_FUV197G01ANJQY_CFPN Serpula lacrymans fgenesh2_kg.2_#_1601_#_0_0_FUV197G01ANJQY_CFPN N 0.000
fgenesh2_kg.10_#_674_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.10_#_674_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.11_#_506_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.11_#_506_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.12_#_1283_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.12_#_1283_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.1_#_273_#_0_0_FUV197G01ALTRZ_CFPN Serpula lacrymans fgenesh2_kg.1_#_273_#_0_0_FUV197G01ALTRZ_CFPN N 0.000
fgenesh2_kg.13_#_550_#_0_0_FUV197G01ALTRZ_CFPN Serpula lacrymans fgenesh2_kg.13_#_550_#_0_0_FUV197G01ALTRZ_CFPN N 0.000
fgenesh2_kg.1_#_367_#_0_0_FUV197G01ANJQY_CFPN Serpula lacrymans fgenesh2_kg.1_#_367_#_0_0_FUV197G01ANJQY_CFPN N 0.000
fgenesh2_kg.13_#_719_#_0_0_FUV197G01D0W21_CFPN Serpula lacrymans fgenesh2_kg.13_#_719_#_0_0_FUV197G01D0W21_CFPN N 0.000
fgenesh2_kg.1_#_429_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.1_#_429_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.14_#_614_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.14_#_614_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.15_#_510_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.15_#_510_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.17_#_150_#_0_0_FS3H43Z04JPR4Q_CFOT Serpula lacrymans fgenesh2_kg.17_#_150_#_0_0_FS3H43Z04JPR4Q_CFOT N 0.000
fgenesh2_kg.20_#_459_#_0_0_FUV197G01ALTRZ_CFPN Serpula lacrymans fgenesh2_kg.20_#_459_#_0_0_FUV197G01ALTRZ_CFPN N 0.000
Genemark.6896_g Serpula lacrymans Genemark.6896_g N 0.000