CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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FUBP3
(
Oryctolagus cuniculus
)
KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00013 (KH_1)
IPR018111
ENSOCUG00000006183
T19186_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOCUP00000005358
KH
79
141
TEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLL
ENSOCUP00000005358
KH
164
228
IQEVLIPASKVGLVIGKGGETIKQLQERTRVKMVMIQDGPLPTGADKPLRITGDPFKVQQAREMV
ENSOCUP00000005358
KH
255
305
SMEVSVPRFAVGIVIGRNGETIKKIQSDAGVRIQFRPGWLPRVSEALGLCR
Links
Other
KH
family RBPs
Other
Oryctolagus cuniculus
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Genemark.10526_g
Serpula lacrymans
Genemark.10526_g
N
0.000
Genemark.4399_g
Serpula lacrymans
Genemark.4399_g
N
0.000
Genemark.446_g
Serpula lacrymans
Genemark.446_g
N
0.000
Genemark.469_g
Serpula lacrymans
Genemark.469_g
N
0.000
Genemark.4749_g
Serpula lacrymans
Genemark.4749_g
N
0.000
Genemark.4999_g
Serpula lacrymans
Genemark.4999_g
N
0.000
Genemark.6054_g
Serpula lacrymans
Genemark.6054_g
N
0.000
Genemark.618_g
Serpula lacrymans
Genemark.618_g
N
0.000
Genemark.6548_g
Serpula lacrymans
Genemark.6548_g
N
0.000
Genemark.8022_g
Serpula lacrymans
Genemark.8022_g
N
0.000
Genemark.8882_g
Serpula lacrymans
Genemark.8882_g
N
0.000
Genemark.940_g
Serpula lacrymans
Genemark.940_g
N
0.000
Genemark.9714_g
Serpula lacrymans
Genemark.9714_g
N
0.000
Genemark.3124_g
Serpula lacrymans
Genemark.3124_g
N
0.000
Genemark.3014_g
Serpula lacrymans
Genemark.3014_g
N
0.000
Genemark.10975_g
Serpula lacrymans
Genemark.10975_g
N
0.000
Genemark.11049_g
Serpula lacrymans
Genemark.11049_g
N
0.000
Genemark.11600_g
Serpula lacrymans
Genemark.11600_g
N
0.000
Genemark.11725_g
Serpula lacrymans
Genemark.11725_g
N
0.000
Genemark.11813_g
Serpula lacrymans
Genemark.11813_g
N
0.000
Genemark.12016_g
Serpula lacrymans
Genemark.12016_g
N
0.000
Genemark.12031_g
Serpula lacrymans
Genemark.12031_g
N
0.000
Genemark.12122_g
Serpula lacrymans
Genemark.12122_g
N
0.000
Genemark.12199_g
Serpula lacrymans
Genemark.12199_g
N
0.000
Genemark.1877_g
Serpula lacrymans
Genemark.1877_g
N
0.000
Genemark.2320_g
Serpula lacrymans
Genemark.2320_g
N
0.000
Genemark.2652_g
Serpula lacrymans
Genemark.2652_g
N
0.000
Genemark.983_g
Serpula lacrymans
Genemark.983_g
N
0.000