gw.576.16.1 (Branchiostoma floridae)
KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00013 (KH_1) IPR018111 gw.576.16.1 T21271_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
KHDRBS2
M176_0.6 		Homo sapiens RAUAAAM RNAcompete
Ray et al.(2013)
RNCMPT00185 		0.741
KHDRBS3
M033_0.6 		Homo sapiens AUAAAV RNAcompete
Ray et al.(2013)
RNCMPT00034 		0.711
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
gw.576.16.1 KH 60 133

Links

Other KH family RBPs
Other Branchiostoma floridae RBPs

54 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK18318.1 Cannabis sativa PK18318.1 N 0.000
Glyma16g18030.1 Glycine max Glyma16g18030.1 N 0.000
mgf004650m Mimulus guttatus mgf004650m N 0.000
GRMZM2G151614 Zea mays GRMZM2G151614 N 0.000
GRMZM2G173777 Zea mays GRMZM2G173777 N 0.000
MDP0000184288 Malus x domestica MDP0000184288 N 0.000
ppa024223m Prunus persica ppa024223m N 0.000
GSVIVG00013204001 Vitis vinifera GSVIVG00013204001 N 0.000
SB02G010740 Sorghum bicolor Sb02g010740 N 0.000
MDP0000122011 Malus x domestica MDP0000122011 N 0.000
Glyma08g35510.1 Glycine max Glyma08g35510.1 N 0.000
fgenesh2_pg.C_scaffold_0000023 Selaginella moellendorfii fgenesh2_pg.C_scaffold_0000023 N 0.000
SUA Arabidopsis thaliana AT3G54230-TAIR-G N 0.000
BRADI2G43127 Brachypodium distachyon BRADI2G43127 N 0.000
XM_002876202.1 Arabidopsis lyrata fgenesh2_kg.5__1812__AT3G54230.1 N 0.000
LOC_Os02g07070 Oryza sativa LOC_Os02g07070 N 0.000
B9MWV7_POPTR Populus trichocarpa POPTR_0017s02120 N 0.000
28611.m000102 Ricinus communis 28611.m000102 N 0.000
cassava30271.valid.m1 Manihot esculenta cassava30271.valid.m1 N 0.000
cassava30272.valid.m1 Manihot esculenta cassava30272.valid.m1 N 0.000
Cucsa.173560 Cucumis sativus Cucsa.173560 N 0.000
PDK_20s1789141g001 Phoenix dactylifera PDK_20s1789141g001 N 0.000