CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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LARP1B
(
Tupaia belangeri
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSTBEG00000004177
T22858_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTBEP00000003632
La
206
261
XXXEYYFSIENLERDFFLRRKMDEQGFLPISLIAGFHRVQALTTNVNLILEALKDS
Links
Other
La
family RBPs
Other
Tupaia belangeri
RBPs
81 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
AAI34816
Xenopus laevis
AAI34816
N
0.776
LARP1B
Oryzias latipes
ENSORLG00000017954
N
0.759
LARP1
Procavia capensis
ENSPCAG00000006407
N
0.724
LARP1B
Procavia capensis
ENSPCAG00000007546
N
0.879
LOC742664
Pan troglodytes
ENSPTRG00000016437
N
0.845
LARP1
Pan troglodytes
ENSPTRG00000017447
N
0.724
LARP1
Pteropus vampyrus
ENSPVAG00000002262
N
0.724
LARP1B
Pteropus vampyrus
ENSPVAG00000005373
N
0.879
Larp1
Rattus norvegicus
ENSRNOG00000031544
N
0.724
LARP1
Oryzias latipes
ENSORLG00000000824
N
0.793
LARP1
Ochotona princeps
ENSOPRG00000013014
N
0.724
Larp1
Mus musculus
ENSMUSG00000037331
N
0.724
Larp1b
Mus musculus
ENSMUSG00000037814
N
0.879
LARP1
Ornithorhynchus anatinus
ENSOANG00000005096
N
0.741
LARP1
Oryctolagus cuniculus
ENSOCUG00000013066
N
0.724
LARP1B
Oryctolagus cuniculus
ENSOCUG00000013330
N
0.897
LARP1B
Otolemur garnettii
ENSOGAG00000005771
N
0.879
LARP1
Otolemur garnettii
ENSOGAG00000016750
N
0.724
LARP1B
Ochotona princeps
ENSOPRG00000005478
N
0.879
Larp1b
Rattus norvegicus
ENSRNOG00000038366
N
0.897
LARP1
Sorex araneus
ENSSARG00000013907
N
0.750
LARP1B
Tursiops truncatus
ENSTTRG00000012984
N
0.897
LARP1
Tursiops truncatus
ENSTTRG00000015934
N
0.724
LARP1B
Vicugna pacos
ENSVPAG00000007223
N
0.897
larp1b
Xenopus tropicalis
ENSXETG00000022512
N
0.741
Ame_R005086
Ailuropoda melanoleuca
Ame_R005086
N
0.724
Ame_R010453
Ailuropoda melanoleuca
Ame_R010453
N
0.897
AAH93491
Xenopus laevis
AAH93491
N
0.707
AAH98998
Xenopus laevis
AAH98998
N
0.741
LARP1
Tarsius syrichta
ENSTSYG00000013732
N
0.741
LARP1B
Tarsius syrichta
ENSTSYG00000002037
N
0.862
LARP1B
Sus scrofa
ENSSSCG00000009073
N
0.879
LARP1
Sus scrofa
ENSSSCG00000017069
N
0.724
LARP1
Spermophilus tridecemlineatus
ENSSTOG00000005678
N
0.724
LARP1
Taeniopygia guttata
ENSTGUG00000000704
N
0.724
LARP2
Taeniopygia guttata
ENSTGUG00000002098
N
0.776
LARP1B
Tetraodon nigroviridis
ENSTNIG00000012398
N
0.741
LARP1B
Takifugu rubripes
ENSTRUG00000005612
N
0.741
LARP1
Takifugu rubripes
ENSTRUG00000009470
N
0.776
LARP1B
Monodelphis domestica
ENSMODG00000012300
N
0.897
LARP1
Monodelphis domestica
ENSMODG00000008663
N
0.724
LARP1B
Macaca mulatta
ENSMMUG00000021347
N
0.845
LARP1
Cavia porcellus
ENSCPOG00000003377
N
0.724
larp1
Danio rerio
ENSDARG00000018434
N
0.759
LARP1
Dasypus novemcinctus
ENSDNOG00000012073
N
0.724
LARP1B
Dasypus novemcinctus
ENSDNOG00000018765
N
0.879
Larp1
Dipodomys ordii
ENSDORG00000002897
N
0.724
ENSDORG00000013445
Dipodomys ordii
ENSDORG00000013445
N
0.776
LOC100071865
Equus caballus
ENSECAG00000001088
N
0.897
LARP1
Equus caballus
ENSECAG00000017002
N
0.724
LOC100393482
Callithrix jacchus
ENSCJAG00000004454
N
0.724
LARP1B
Callithrix jacchus
ENSCJAG00000003338
N
0.862
LARP1
Anolis carolinensis
ENSACAG00000004071
N
0.741
LARP1B
Anolis carolinensis
ENSACAG00000011338
N
0.879
LARP1
Bos taurus
ENSBTAG00000008443
N
0.707
LARP1B
Bos taurus
ENSBTAG00000012135
N
0.897
LARP1B
Canis familiaris
ENSCAFG00000003831
N
0.897
LARP1
Canis familiaris
ENSCAFG00000017639
N
0.724
LARP1B
Choloepus hoffmanni
ENSCHOG00000005354
N
0.862
LARP1
Choloepus hoffmanni
ENSCHOG00000012716
N
0.714
LARP1B
Echinops telfairi
ENSETEG00000012497
N
0.964
LARP1
Echinops telfairi
ENSETEG00000020251
N
0.724
LARP1
Macropus eugenii
ENSMEUG00000002957
N
0.724
LARP1B
Macropus eugenii
ENSMEUG00000010308
N
0.789
LARP1B
Meleagris gallopavo
ENSMGAG00000004809
N
0.839
LARP1
Meleagris gallopavo
ENSMGAG00000005696
N
0.724
LARP1
Microcebus murinus
ENSMICG00000000837
N
0.724
LARP1
Myotis lucifugus
ENSMLUG00000002608
N
0.724
LARP1B
Myotis lucifugus
ENSMLUG00000010229
N
0.897
LARP1
Macaca mulatta
ENSMMUG00000009411
N
0.724
LARP1
Loxodonta africana
ENSLAFG00000008991
N
0.724
ENSLAFG00000008473
Loxodonta africana
ENSLAFG00000008473
N
0.897
LARP1
Felis catus
ENSFCAG00000000592
N
0.724
LARP1B
Homo sapiens
ENSG00000138709
N
0.845
LARP1
Homo sapiens
ENSG00000155506
N
0.724
LARP1B
Gasterosteus aculeatus
ENSGACG00000004609
N
0.759
LARP1
Gallus gallus
ENSGALG00000004001
N
0.724
LARP2
Gallus gallus
ENSGALG00000010207
N
0.810
ENSGGOG00000006048
Gorilla gorilla
ENSGGOG00000006048
N
0.724
ENSGGOG00000024102
Gorilla gorilla
ENSGGOG00000024102
N
0.724
nasonia_NCBI_hmm577234
Nasonia vitripennis
nasonia_NCBI_hmm577234
N
0.707