CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
LARP1
(
Sorex araneus
)
La
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF05383 (La)
IPR006630
ENSSARG00000013907
T22849_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSARP00000012567
La
1
53
EYYFSVDNLERDFFLRRKMDAAGFLPITLIASFHRVQALTTDISLIFAALKDS
Links
Other
La
family RBPs
Other
Sorex araneus
RBPs
79 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
LARP1
Homo sapiens
ENSG00000155506
N
0.897
ENSGGOG00000006048
Gorilla gorilla
ENSGGOG00000006048
N
0.897
ENSGGOG00000024102
Gorilla gorilla
ENSGGOG00000024102
N
0.897
LARP1
Loxodonta africana
ENSLAFG00000008991
N
0.897
LARP1
Felis catus
ENSFCAG00000000592
N
0.897
LARP1
Equus caballus
ENSECAG00000017002
N
0.897
LOC100393482
Callithrix jacchus
ENSCJAG00000004454
N
0.897
LARP1
Cavia porcellus
ENSCPOG00000003377
N
0.897
LARP1
Dasypus novemcinctus
ENSDNOG00000012073
N
0.897
Larp1
Dipodomys ordii
ENSDORG00000002897
N
0.897
LARP1
Microcebus murinus
ENSMICG00000000837
N
0.897
LARP1
Myotis lucifugus
ENSMLUG00000002608
N
0.897
LARP1
Procavia capensis
ENSPCAG00000006407
N
0.897
LARP1
Pan troglodytes
ENSPTRG00000017447
N
0.897
LARP1
Pteropus vampyrus
ENSPVAG00000002262
N
0.897
Larp1
Rattus norvegicus
ENSRNOG00000031544
N
0.897
LARP1
Ochotona princeps
ENSOPRG00000013014
N
0.897
LARP1
Otolemur garnettii
ENSOGAG00000016750
N
0.897
LARP1
Macaca mulatta
ENSMMUG00000009411
N
0.897
Larp1
Mus musculus
ENSMUSG00000037331
N
0.897
LARP1
Oryctolagus cuniculus
ENSOCUG00000013066
N
0.897
LARP1
Canis familiaris
ENSCAFG00000017639
N
0.897
LARP1
Echinops telfairi
ENSETEG00000020251
N
0.897
LARP1
Tursiops truncatus
ENSTTRG00000015934
N
0.897
Ame_R005086
Ailuropoda melanoleuca
Ame_R005086
N
0.897
LARP1
Spermophilus tridecemlineatus
ENSSTOG00000005678
N
0.897
LARP1
Sus scrofa
ENSSSCG00000017069
N
0.897
LARP1
Bos taurus
ENSBTAG00000008443
N
0.879
LARP1
Meleagris gallopavo
ENSMGAG00000005696
N
0.845
LARP1
Gallus gallus
ENSGALG00000004001
N
0.845
LARP1
Tarsius syrichta
ENSTSYG00000013732
N
0.845
LARP1
Taeniopygia guttata
ENSTGUG00000000704
N
0.845
LARP1
Choloepus hoffmanni
ENSCHOG00000012716
N
0.839
LARP1
Tupaia belangeri
ENSTBEG00000003381
N
0.810
LARP1
Anolis carolinensis
ENSACAG00000004071
N
0.810
LARP1
Ornithorhynchus anatinus
ENSOANG00000005096
N
0.810
larp1
Xenopus tropicalis
ENSXETG00000008413
N
0.776
LARP1B
Oryzias latipes
ENSORLG00000017954
N
0.776
LARP1
Monodelphis domestica
ENSMODG00000008663
N
0.776
LARP1
Macropus eugenii
ENSMEUG00000002957
N
0.776
larp1
Danio rerio
ENSDARG00000018434
N
0.776
LARP1
Erinaceus europaeus
ENSEEUG00000001065
N
0.776
ENSCING00000003088
Ciona intestinalis
ENSCING00000003088
N
0.774
LARP1B
Meleagris gallopavo
ENSMGAG00000004809
N
0.764
LARP1B
Tetraodon nigroviridis
ENSTNIG00000012398
N
0.759
AAH93491
Xenopus laevis
AAH93491
N
0.759
LARP1
Oryzias latipes
ENSORLG00000000824
N
0.759
LARP1
Takifugu rubripes
ENSTRUG00000009470
N
0.759
LARP1B
Anolis carolinensis
ENSACAG00000011338
N
0.759
LARP1B
Tupaia belangeri
ENSTBEG00000004177
N
0.750
LARP1B
Echinops telfairi
ENSETEG00000012497
N
0.750
LARP1B
Choloepus hoffmanni
ENSCHOG00000005354
N
0.741
LARP1B
Otolemur garnettii
ENSOGAG00000005771
N
0.741
LARP1B
Takifugu rubripes
ENSTRUG00000005612
N
0.741
LARP1B
Monodelphis domestica
ENSMODG00000012300
N
0.741
ENSCSAVG00000008913
Ciona savignyi
ENSCSAVG00000008913
N
0.727
LARP2
Gallus gallus
ENSGALG00000010207
N
0.724
LARP1B
Vicugna pacos
ENSVPAG00000007223
N
0.724
LARP1B
Gasterosteus aculeatus
ENSGACG00000004609
N
0.724
LARP1B
Ochotona princeps
ENSOPRG00000005478
N
0.724
LARP1B
Sus scrofa
ENSSSCG00000009073
N
0.724
Larp1b
Rattus norvegicus
ENSRNOG00000038366
N
0.724
LARP1B
Bos taurus
ENSBTAG00000012135
N
0.724
LARP1B
Pteropus vampyrus
ENSPVAG00000005373
N
0.724
LARP1B
Myotis lucifugus
ENSMLUG00000010229
N
0.724
ENSLAFG00000008473
Loxodonta africana
ENSLAFG00000008473
N
0.724
LARP1B
Canis familiaris
ENSCAFG00000003831
N
0.724
Ame_R010453
Ailuropoda melanoleuca
Ame_R010453
N
0.724
LARP1B
Dasypus novemcinctus
ENSDNOG00000018765
N
0.724
Larp1b
Mus musculus
ENSMUSG00000037814
N
0.724
LARP1B
Oryctolagus cuniculus
ENSOCUG00000013330
N
0.724
LARP1B
Tursiops truncatus
ENSTTRG00000012984
N
0.724
LOC100071865
Equus caballus
ENSECAG00000001088
N
0.724
LARP1B
Tarsius syrichta
ENSTSYG00000002037
N
0.707
LARP1B
Macaca mulatta
ENSMMUG00000021347
N
0.707
LARP1B
Procavia capensis
ENSPCAG00000007546
N
0.707
nasonia_NCBI_hmm577234
Nasonia vitripennis
nasonia_NCBI_hmm577234
N
0.707
LOC742664
Pan troglodytes
ENSPTRG00000016437
N
0.707
LARP1B
Homo sapiens
ENSG00000138709
N
0.707