VDAG_05840 (Verticillium dahliae)
PUF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00806 (PUF)
PF00076 (RRM_1) 		IPR001313
IPR000504 		VDAG_05840 T25332_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
VDAG_05840T0 RRM 406 467
VDAG_05840T0 PUF 617 651
VDAG_05840T0 PUF 653 687
VDAG_05840T0 PUF 691 723
VDAG_05840T0 PUF 725 760
VDAG_05840T0 PUF 764 797

Links

Other PUF,RRM family RBPs
Other Verticillium dahliae RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
EDI_110350 Entamoeba dispar EDI_110350 N 0.000
EDI_199260 Entamoeba dispar EDI_199260 N 0.000
EHI_054760 Entamoeba histolytica EHI_054760 N 0.000
estExt_Genewise1Plus.C_40228 Batrachochytrium dendrobatidis estExt_Genewise1Plus.C_40228 N 0.000