RBM5 (Tursiops truncatus)
RanBP ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00641 (zf-RanBP)
PF00076 (RRM_1) 		IPR001876
IPR000504 		ENSTTRG00000007717 T25678_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
RBM5
M145_0.6 		Homo sapiens SAAGGRG RNAcompete
Ray et al.(2013)
RNCMPT00154 		0.908
RBM5
M053_0.6 		Homo sapiens GARGGWR RNAcompete
Ray et al.(2013)
RNCMPT00055 		0.908
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSTTRP00000007300 RRM 98 169
ENSTTRP00000007300 RanBP ZF 186 208
ENSTTRP00000007300 RRM 226 295

Links

Other RanBP ZF,RRM family RBPs
Other Tursiops truncatus RBPs

46 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PK19238.1 Cannabis sativa PK19238.1 N 0.000
Glyma02g47360.1 Glycine max Glyma02g47360.1 N 0.000
Glyma13g03760.1 Glycine max Glyma13g03760.1 N 0.000
Glyma14g01390.1 Glycine max Glyma14g01390.1 N 0.000
Glyma20g10260.1 Glycine max Glyma20g10260.1 N 0.000
mgf000315m Mimulus guttatus mgf000315m N 0.000
mgf010225m Mimulus guttatus mgf010225m N 0.000
mgf013586m Mimulus guttatus mgf013586m N 0.000
mgf020489m Mimulus guttatus mgf020489m N 0.000
GRMZM2G335716 Zea mays GRMZM2G335716 N 0.000
MDP0000269989 Malus x domestica MDP0000269989 N 0.000
fgenesh1_pg.scaffold_150000075 Physcomitrella patens fgenesh1_pg.scaffold_150000075 N 0.000
estExt_gwp_gw1.C_840209 Physcomitrella patens estExt_gwp_gw1.C_840209 N 0.000
BRADI1G48140 Brachypodium distachyon BRADI1G48140 N 0.000
GSVIVG00024807001 Vitis vinifera GSVIVG00024807001 N 0.000
LOC_Os06g07350 Oryza sativa LOC_Os06g07350 N 0.000
LOC_Os07g18050 Oryza sativa LOC_Os07g18050 N 0.000
B9HP87_POPTR Populus trichocarpa POPTR_0009s04600 N 0.000
SB04G030200 Sorghum bicolor Sb04g030200 N 0.000
SB10G004840 Sorghum bicolor Sb10g004840 N 0.000
29751.m001799 Ricinus communis 29751.m001799 N 0.000
Cucsa.090060 Cucumis sativus Cucsa.090060 N 0.000
estExt_Genewise1.C_510373 Selaginella moellendorfii estExt_Genewise1.C_510373 N 0.000
MDP0000305455 Malus x domestica MDP0000305455 N 0.000