MDP0000305455 (Malus x domestica)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 MDP0000305455 T57614_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
MDP0000305455 RRM 699 764

Links

Other RRM family RBPs
Other Malus x domestica RBPs

22 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
GSVIVG00024807001 Vitis vinifera GSVIVG00024807001 N 0.955
Cucsa.090060 Cucumis sativus Cucsa.090060 N 0.939
Glyma13g03760.1 Glycine max Glyma13g03760.1 N 0.924
Glyma02g47360.1 Glycine max Glyma02g47360.1 N 0.924
Glyma20g10260.1 Glycine max Glyma20g10260.1 N 0.924
Glyma14g01390.1 Glycine max Glyma14g01390.1 N 0.924
mgf010225m Mimulus guttatus mgf010225m N 0.909
mgf013586m Mimulus guttatus mgf013586m N 0.909
29751.m001799 Ricinus communis 29751.m001799 N 0.909
mgf000315m Mimulus guttatus mgf000315m N 0.909
GRMZM2G335716 Zea mays GRMZM2G335716 N 0.894
mgf020489m Mimulus guttatus mgf020489m N 0.894
BRADI1G48140 Brachypodium distachyon BRADI1G48140 N 0.894
SB04G030200 Sorghum bicolor Sb04g030200 N 0.894
SB10G004840 Sorghum bicolor Sb10g004840 N 0.894
LOC_Os07g18050 Oryza sativa LOC_Os07g18050 N 0.879
LOC_Os06g07350 Oryza sativa LOC_Os06g07350 N 0.879
MDP0000269989 Malus x domestica MDP0000269989 N 0.853
PK19238.1 Cannabis sativa PK19238.1 N 0.803
estExt_gwp_gw1.C_840209 Physcomitrella patens estExt_gwp_gw1.C_840209 N 0.788
fgenesh1_pg.scaffold_150000075 Physcomitrella patens fgenesh1_pg.scaffold_150000075 N 0.742
B9HP87_POPTR Populus trichocarpa POPTR_0009s04600 N 0.721