CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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tab3
(
Danio rerio
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSDARG00000062063
T26378_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDARP00000083707
RanBP ZF
544
572
EGAQWNCESCTFLNHPALHRCEQCEMPRN
Links
Other
RanBP ZF
family RBPs
Other
Danio rerio
RBPs
82 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
SRSF5
Dasypus novemcinctus
ENSDNOG00000006160
I
0.000
estExt_fgenesh2_pm.C_690014
Branchiostoma floridae
estExt_fgenesh2_pm.C_690014
I
0.000