CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TAB3
(
Procavia capensis
)
RanBP ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00641 (zf-RanBP)
IPR001876
ENSPCAG00000001132
T26701_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000001051
RanBP ZF
650
679
EGAPWNCDSCTFLNHPALNRCEQCEMPRYT
Links
Other
RanBP ZF
family RBPs
Other
Procavia capensis
RBPs
79 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Tbg972.9.4840
Trypanosoma brucei
Tbg972.9.4840
D
0.000
LbrM04_V2.1190
Leishmania braziliensis
LbrM04_V2.1190
I
0.000
LinJ04_V3.1190
Leishmania infantum
LinJ04_V3.1190
I
0.000
LmjF04.1170
Leishmania major
LmjF04.1170
I
0.000
LmxM04.1170
Leishmania mexicana
LmxM04.1170
I
0.000
Tc00.1047053506649.80
Trypanosoma cruzi
Tc00.1047053506649.80
I
0.000
TcIL3000.9.3060
Trypanosoma congolense
TcIL3000.9.3060
I
0.000