Tbg972.9.4840 (Trypanosoma brucei)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Tbg972.9.4840 T47689_0.6 EuPathDB (2010-Sep-21)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
Tbg972.9.4840
M193_0.6		 Trypanosoma brucei CUUUCU RNAcompete
Ray et al.(2013)
RNCMPT00220 		(Direct)

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M193_0.6 RRM 51 117
M193_0.6 RRM 151 214

RNA Binding Domains

Protein ID Domain From To Sequence
Tbg972.9.4840 RRM 84 150
Tbg972.9.4840 RRM 184 247

Links

Other RRM family RBPs
Other Trypanosoma brucei RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TvY486_0903590 Trypanosoma vivax TvY486_0903590 I 0.947
Tc00.1047053506649.80 Trypanosoma cruzi Tc00.1047053506649.80 I 0.939
TcIL3000.9.3060 Trypanosoma congolense TcIL3000.9.3060 I 0.931
LmxM04.1170 Leishmania mexicana LmxM04.1170 I 0.789
LmjF04.1170 Leishmania major LmjF04.1170 I 0.789
LbrM04_V2.1190 Leishmania braziliensis LbrM04_V2.1190 I 0.789
LinJ04_V3.1190 Leishmania infantum LinJ04_V3.1190 I 0.789