CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CLUG_01085
(
Candida lusitaniae
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CLUG_01085
T28711_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CLUT_01085
RRM
191
243
VFVGNVSNNVITSRQTYKQFKKLFKSIGKVSSIRFRSIAFDEAVPRKVAFVKK
CLUT_01085
RRM
245
282
LHSTRDTVNAYVVFAEKEASMKAASRLNATIFDHHHIR
CLUT_01085
RRM
298
363
IFVGNLDFEEQEERLWRYFNSKTNDDVESVRIVRDSKTNLGKGFALVQFKDSLSVDKALLLHEKPM
Links
Other
RRM
family RBPs
Other
Candida lusitaniae
RBPs
2 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
DEHA0C17402g
Debaryomyces hansenii
DEHA0C17402g
N
0.710
PGUG_03842
Candida guilliermondii
PGUG_03842
N
0.719