CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TESG_06009
(
Trichophyton tonsurans
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
TESG_06009
T31183_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TESG_06009T0
RRM
9
77
LYVTGFGHGTRARELAYEFERYGRLVRCDIPAPRTASSRLFAFVEYESRRDADDAYHEMHNKRIGRDDV
Links
Other
RRM
family RBPs
Other
Trichophyton tonsurans
RBPs
40 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NUPL2
Oryzias latipes
ENSORLG00000005203
N
0.000
GK15175
Drosophila willistoni
FBgn0217180
N
0.000
GJ17466
Drosophila virilis
FBgn0204638
N
0.000
GD22145
Drosophila simulans
FBgn0193555
N
0.000
GL19578
Drosophila persimilis
FBgn0157176
N
0.000
GI17681
Drosophila mojavensis
FBgn0140422
N
0.000
GH13061
Drosophila grimshawi
FBgn0120538
N
0.000
GG10287
Drosophila erecta
FBgn0102596
N
0.000
GF14754
Drosophila ananassae
FBgn0091781
N
0.000
GA15081-RA
Drosophila pseudoobscura
FBgn0075106
N
0.000
CG18789
Drosophila melanogaster
FBgn0042127
N
0.000
CG18787
Drosophila melanogaster
FBgn0042125
N
0.000
GE12566
Drosophila yakuba
FBgn0230297
N
0.000