CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PK11911.1
(
Cannabis sativa
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
PK11911.1
T31678_0.6
Cannabis sativa genome (2012-Feb-20)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK11911.1
RRM
45
115
CYVGNMSFYTTEEQVYELFSRAGEIKKIIMGLDKNTKTPCGFCFVIYYSREDTEDSVKYISGTILDDRPIR
Links
Other
RRM
family RBPs
Other
Cannabis sativa
RBPs
73 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Q0VCT7_BOVIN
Bos taurus
ENSBTAG00000019553
N
0.000
AKAP17A
Sus scrofa
ENSSSCG00000012627
N
0.000
Akap17b
Rattus norvegicus
ENSRNOG00000009746
N
0.000
AKAP17A
Oryctolagus cuniculus
ENSOCUG00000024332
N
0.000
ENSOANG00000011324
Ornithorhynchus anatinus
ENSOANG00000011324
N
0.000
Akap17b
Mus musculus
ENSMUSG00000059708
N
0.000
ENSLAFG00000020744
Loxodonta africana
ENSLAFG00000020744
N
0.000
ENSECAG00000011820
Equus caballus
ENSECAG00000011820
N
0.000
AKAP17A
Cavia porcellus
ENSCPOG00000027526
N
0.000
ENSCJAG00000005163
Callithrix jacchus
ENSCJAG00000005163
N
0.000
ENSCAFG00000018374
Canis familiaris
ENSCAFG00000018374
N
0.000
Ame_R003931
Ailuropoda melanoleuca
Ame_R003931
N
0.000