CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
DGIL_AUG5s17283g3t1
(
Acyrtosiphon pisum
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
DGIL_AUG5s17283g3t1
T32034_0.6
DroSpeGe (2008-Jul-18)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
DGIL_AUG5s17283g3t1
RRM
118
173
IHIRNIPNEVTEAEVIHLGIPFGKVTNVLVLKGKNQAFLEMADETSASAMVTYFTT
DGIL_AUG5s17283g3t1
RRM
232
298
VIVEHMVFPISLDVLYEIFSRYGKVLKIVTFTKNNSFQVLIQYPDVVTAQSAKLSLDGQNIYTSCCK
DGIL_AUG5s17283g3t1
RRM
447
513
LLVSNLNEEMVTPDAIFTLFGVYGDVLRVKILYNKKDGALVQMAEPHQAHLAMLHLDKVRLYGKYIR
DGIL_AUG5s17283g3t1
RRM
564
629
LHLSNIPTTLSEDFLKTAFENNTFTVKDFKFFPKDRKMALIQMESLEEAVAALIKMHNYRLSEQNH
Links
Other
RRM
family RBPs
Other
Acyrtosiphon pisum
RBPs
14 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Glyma10g12900.1
Glycine max
Glyma10g12900.1
N
0.000
Glyma17g36120.1
Glycine max
Glyma17g36120.1
N
0.000