AAEL010318 (Aedes aegypti)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 AAEL010318 T32394_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
pAbp
M130_0.6 		Drosophila melanogaster GAAAAHV RNAcompete
Ray et al.(2013)
RNCMPT00139 		0.791
PABPC4
M042_0.6 		Homo sapiens AAAAAAR RNAcompete
Ray et al.(2013)
RNCMPT00043 		0.750
PABPC1
M349_0.6 		Homo sapiens ACDAAYM SELEX
Cook et al.(2011)
950_7908267 		0.743
PABPC1
M275_0.6 		Homo sapiens AAAAA SELEX
Cook et al.(2011)
24_7908267 		0.743
PABPC1
M146_0.6 		Homo sapiens ARAAAAM RNAcompete
Ray et al.(2013)
RNCMPT00155 		0.743
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
AAEL010318-PA RRM 4 74
AAEL010318-PA RRM 92 161
AAEL010318-PA RRM 185 253
AAEL010318-PA RRM 288 356
AAEL010318-PB RRM 4 74
AAEL010318-PB RRM 92 161
AAEL010318-PB RRM 185 253
AAEL010318-PB RRM 288 356

Links

Other RRM family RBPs
Other Aedes aegypti RBPs

140 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
fgenesh3_pg.105__14 Postia placenta fgenesh3_pg.105__14 N 0.000
fgenesh3_pg.348__2 Postia placenta fgenesh3_pg.348__2 N 0.000
fgenesh3_pg.359__1 Postia placenta fgenesh3_pg.359__1 N 0.000
fgenesh3_pg.44__55 Postia placenta fgenesh3_pg.44__55 N 0.000
fgenesh3_pg.49__68 Postia placenta fgenesh3_pg.49__68 N 0.000
fgenesh3_pg.51__8 Postia placenta fgenesh3_pg.51__8 N 0.000
fgenesh3_pg.53__89 Postia placenta fgenesh3_pg.53__89 N 0.000
fgenesh3_pg.63__75 Postia placenta fgenesh3_pg.63__75 N 0.000
fgenesh3_pg.647__1 Postia placenta fgenesh3_pg.647__1 N 0.000
fgenesh3_pg.66__60 Postia placenta fgenesh3_pg.66__60 N 0.000
fgenesh3_pg.7__151 Postia placenta fgenesh3_pg.7__151 N 0.000
fgenesh3_pg.77__33 Postia placenta fgenesh3_pg.77__33 N 0.000
fgenesh3_pg.89__23 Postia placenta fgenesh3_pg.89__23 N 0.000
fgenesh3_pg.89__29 Postia placenta fgenesh3_pg.89__29 N 0.000
fgenesh3_pg.900__1 Postia placenta fgenesh3_pg.900__1 N 0.000
fgenesh3_pg.9__147 Postia placenta fgenesh3_pg.9__147 N 0.000
fgenesh3_pg.326__2 Postia placenta fgenesh3_pg.326__2 N 0.000
fgenesh3_pg.2__92 Postia placenta fgenesh3_pg.2__92 N 0.000
fgenesh3_pg.282__8 Postia placenta fgenesh3_pg.282__8 N 0.000
fgenesh3_pg.10__6 Postia placenta fgenesh3_pg.10__6 N 0.000
fgenesh3_pg.107__20 Postia placenta fgenesh3_pg.107__20 N 0.000
fgenesh3_pg.11__132 Postia placenta fgenesh3_pg.11__132 N 0.000
fgenesh3_pg.116__47 Postia placenta fgenesh3_pg.116__47 N 0.000
fgenesh3_pg.11__80 Postia placenta fgenesh3_pg.11__80 N 0.000
fgenesh3_pg.121__36 Postia placenta fgenesh3_pg.121__36 N 0.000
fgenesh3_pg.136__2 Postia placenta fgenesh3_pg.136__2 N 0.000
fgenesh3_pg.150__7 Postia placenta fgenesh3_pg.150__7 N 0.000
fgenesh3_pg.178__10 Postia placenta fgenesh3_pg.178__10 N 0.000
fgenesh3_pg.19__17 Postia placenta fgenesh3_pg.19__17 N 0.000
fgenesh3_pg.19__42 Postia placenta fgenesh3_pg.19__42 N 0.000
fgenesh3_pg.194__2 Postia placenta fgenesh3_pg.194__2 N 0.000
fgenesh3_pg.223__10 Postia placenta fgenesh3_pg.223__10 N 0.000
fgenesh3_pg.264__1 Postia placenta fgenesh3_pg.264__1 N 0.000
fgenesh3_pg.266__9 Postia placenta fgenesh3_pg.266__9 N 0.000
fgenesh3_pg.9__2 Postia placenta fgenesh3_pg.9__2 N 0.000