CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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NFIA_037860
(
Neosartorya fischeri
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
CADNFIAG00003716
T33800_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
CADNFIAP00003627
RRM
504
566
LFVGGVTSSEAHLRSLFSKFGIVQTCIVNVDKRHAFIKMISRQDAVSAREGMESYKSGDMQLR
Links
Other
RRM
family RBPs
Other
Neosartorya fischeri
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ARB_07074
Arthroderma benhamiae
ARB_07074
N
0.794
ACLA_000920
Aspergillus clavatus
CADACLAG00000330
N
0.952
AFLA_007030
Aspergillus flavus
CADAFLAG00010766
N
0.952
AFUA_5G04240
Aspergillus fumigatus
CADAFUAG00002869
N
0.937
An09g06700
Aspergillus niger
CADANGAG00008209
N
0.952
ANIA_08276
Aspergillus nidulans
CADANIAG00004336
N
0.921
AO090102000629
Aspergillus oryzae
CADAORAG00009913
N
0.952
ATEG_07989
Aspergillus terreus
CADATEAG00005162
N
0.921
fgenesh1_pg.00153_#_263
Aspergillus carbonarius
fgenesh1_pg.00153_#_263
N
0.952
Pc12g05410
Penicillium chrysogenum
Pc12g05410
N
0.857
UREG_04091
Uncinocarpus reesii
UREG_04091
N
0.794
TRV_04696
Trichophyton verrucosum
TRV_04696
N
0.794
BDBG_05846
Blastomyces dermatitidis
BDBG_05846
N
0.841
CIMG_06293
Coccidioides immitis
CIMG_06293
N
0.841
CPSG_00779
Coccidioides posadasii
CPSG_00779
N
0.841
HCAG_11161
Histoplasma capsulatum
HCAG_11161
N
0.825
MCYG_06836
Microsporum canis
MCYG_06836
N
0.825
MGYG_03781
Microsporum gypseum
MGYG_03781
N
0.825
PABG_07318
Paracoccidioides brasiliensis
PABG_07318
N
0.841
TEQG_02925
Trichophyton equinum
TEQG_02925
N
0.794
TERG_04128
Trichophyton rubrum
TERG_04128
N
0.794
PMAA_095320
Penicillium marneffei
PMAA_095320
N
0.794