ENSACAG00000002544 (Anolis carolinensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSACAG00000002544 T34602_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC4
M042_0.6 		Homo sapiens AAAAAAR RNAcompete
Ray et al.(2013)
RNCMPT00043 		0.875
PABPC1
M349_0.6 		Homo sapiens ACDAAYM SELEX
Cook et al.(2011)
950_7908267 		0.835
PABPC1
M275_0.6 		Homo sapiens AAAAA SELEX
Cook et al.(2011)
24_7908267 		0.835
PABPC1
M146_0.6 		Homo sapiens ARAAAAM RNAcompete
Ray et al.(2013)
RNCMPT00155 		0.835
PABPC3
M144_0.6 		Homo sapiens RAAAACM RNAcompete
Ray et al.(2013)
RNCMPT00153 		0.774
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000002571 RRM 1 58
ENSACAP00000002571 RRM 76 144
ENSACAP00000002571 RRM 168 236
ENSACAP00000002571 RRM 271 339

Links

Other RRM family RBPs
Other Anolis carolinensis RBPs

139 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
ENSACAG00000000209 Anolis carolinensis ENSACAG00000000209 N 0.000
HELZ Otolemur garnettii ENSOGAG00000002482 N 0.000
HELZ Oryzias latipes ENSORLG00000013894 N 0.000
HELZ Procavia capensis ENSPCAG00000001731 N 0.000
ENSPPYG00000008564 Pongo pygmaeus ENSPPYG00000008564 N 0.000
HELZ Pan troglodytes ENSPTRG00000009562 N 0.000
Helz Rattus norvegicus ENSRNOG00000003213 N 0.000
HELZ Sorex araneus ENSSARG00000004508 N 0.000
HELZ Sus scrofa ENSSSCG00000017272 N 0.000
HELZ Tupaia belangeri ENSTBEG00000003140 N 0.000
HELZ Taeniopygia guttata ENSTGUG00000004401 N 0.000
HELZ Tetraodon nigroviridis ENSTNIG00000014131 N 0.000
HELZ Takifugu rubripes ENSTRUG00000000488 N 0.000
HELZ Tarsius syrichta ENSTSYG00000009414 N 0.000
HELZ Tursiops truncatus ENSTTRG00000016778 N 0.000
HELZ Vicugna pacos ENSVPAG00000001848 N 0.000
helz Xenopus tropicalis ENSXETG00000015395 N 0.000
HELZ Oryctolagus cuniculus ENSOCUG00000008856 N 0.000
HELZ Ornithorhynchus anatinus ENSOANG00000008056 N 0.000
Helz Mus musculus ENSMUSG00000020721 N 0.000
Q2KJH3_BOVIN Bos taurus ENSBTAG00000004746 N 0.000
HELZ Canis familiaris ENSCAFG00000011422 N 0.000
LOC100391093 Callithrix jacchus ENSCJAG00000032527 N 0.000
HELZ Cavia porcellus ENSCPOG00000014911 N 0.000
HELZ Danio rerio ENSDARG00000030560 N 0.000
HELZ Equus caballus ENSECAG00000010404 N 0.000
HELZ Erinaceus europaeus ENSEEUG00000010327 N 0.000
HELZ Homo sapiens ENSG00000198265 N 0.000
HELZ Gasterosteus aculeatus ENSGACG00000018530 N 0.000
HELZ Gallus gallus ENSGALG00000021439 N 0.000
HELZ Gorilla gorilla ENSGGOG00000012312 N 0.000
HELZ Loxodonta africana ENSLAFG00000003860 N 0.000
HELZ Meleagris gallopavo ENSMGAG00000007422 N 0.000
HELZ Myotis lucifugus ENSMLUG00000000962 N 0.000
HELZ Macaca mulatta ENSMMUG00000002959 N 0.000
HELZ Monodelphis domestica ENSMODG00000004034 N 0.000
Ame_R013136 Ailuropoda melanoleuca Ame_R013136 N 0.000