ENSACAG00000002544 (Anolis carolinensis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSACAG00000002544 T34602_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
PABPC4
M042_0.6 		Homo sapiens AAAAAAR RNAcompete
Ray et al.(2013)
RNCMPT00043 		0.875
PABPC1
M275_0.6 		Homo sapiens AAAAA SELEX
Cook et al.(2011)
24_7908267 		0.835
PABPC1
M146_0.6 		Homo sapiens ARAAAAM RNAcompete
Ray et al.(2013)
RNCMPT00155 		0.835
PABPC1
M349_0.6 		Homo sapiens ACDAAYM SELEX
Cook et al.(2011)
950_7908267 		0.835
PABPC3
M144_0.6 		Homo sapiens RAAAACM RNAcompete
Ray et al.(2013)
RNCMPT00153 		0.774
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSACAP00000002571 RRM 1 58
ENSACAP00000002571 RRM 76 144
ENSACAP00000002571 RRM 168 236
ENSACAP00000002571 RRM 271 339

Links

Other RRM family RBPs
Other Anolis carolinensis RBPs

139 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PABPC3 Homo sapiens ENSG00000151846 D 0.774
PABPC1 Homo sapiens ENSG00000070756 D 0.835
PABPC4 Homo sapiens ENSG00000090621 D 0.875
Pabpc3 Rattus norvegicus ENSRNOG00000017367 I 0.778
ENSOCUG00000004354 Oryctolagus cuniculus ENSOCUG00000004354 I 0.835
D4AC21_RAT Rattus norvegicus ENSRNOG00000015642 I 0.860
Pabpc2 Rattus norvegicus ENSRNOG00000014527 I 0.781
Pabpc1 Rattus norvegicus ENSRNOG00000008639 I 0.839
ENSPVAG00000016640 Pteropus vampyrus ENSPVAG00000016640 I 0.835
D3ZEY8_RAT Rattus norvegicus ENSRNOG00000028592 I 0.839
PABPC4 Sus scrofa ENSSSCG00000003660 I 0.875
ENSSSCG00000006063 Sus scrofa ENSSSCG00000006063 I 0.835
PABPC1L Sus scrofa ENSSSCG00000007382 I 0.724
PABPC1L Spermophilus tridecemlineatus ENSSTOG00000003739 I 0.727
PABPC4 Spermophilus tridecemlineatus ENSSTOG00000010416 I 0.738
PABPC4 Taeniopygia guttata ENSTGUG00000001266 I 0.932
PABPC1L Taeniopygia guttata ENSTGUG00000005114 I 0.763
PABPC1L Pteropus vampyrus ENSPVAG00000012663 I 0.720
Q2VIP2_PANTR Pan troglodytes ENSPTRG00000022593 I 0.785
XR_023909.1 Pan troglodytes ENSPTRG00000020475 I 0.832
ENSOCUG00000023935 Oryctolagus cuniculus ENSOCUG00000023935 I 0.835
PABPC4 Otolemur garnettii ENSOGAG00000004067 I 0.731
ENSOPRG00000009667 Ochotona princeps ENSOPRG00000009667 I 0.835
PABPC1L Ochotona princeps ENSOPRG00000011846 I 0.728
PABPC4 Ochotona princeps ENSOPRG00000011984 I 0.875
PABPC3 Oryzias latipes ENSORLG00000002691 I 0.821
ENSORLG00000003008 Oryzias latipes ENSORLG00000003008 I 0.796
PABPC1L Oryzias latipes ENSORLG00000010322 I 0.721
PABPC4 Oryzias latipes ENSORLG00000017479 I 0.878
PABPC4 Procavia capensis ENSPCAG00000003341 I 0.771
ENSPPYG00000001506 Pongo pygmaeus ENSPPYG00000001506 I 0.875
ENSPPYG00000005219 Pongo pygmaeus ENSPPYG00000005219 I 0.799
ENSPPYG00000011042 Pongo pygmaeus ENSPPYG00000011042 I 0.713
ENSPPYG00000018790 Pongo pygmaeus ENSPPYG00000018790 I 0.835
PABPC4 Pan troglodytes ENSPTRG00000000573 I 0.875
PABPC1L Pan troglodytes ENSPTRG00000013531 I 0.717
PABPC1 Taeniopygia guttata ENSTGUG00000012067 I 0.839
ENSTNIG00000009153 Tetraodon nigroviridis ENSTNIG00000009153 I 0.806
Ame_R001741 Ailuropoda melanoleuca Ame_R001741 I 0.806
Ame_R005305 Ailuropoda melanoleuca Ame_R005305 I 0.724
Ame_R019277 Ailuropoda melanoleuca Ame_R019277 I 0.803
AAA60936 Xenopus laevis AAA60936 I 0.828
AAH52100 Xenopus laevis AAH52100 I 0.832
AAH71118 Xenopus laevis AAH71118 I 0.763
AAH72110 Xenopus laevis AAH72110 I 0.828
AAH73435 Xenopus laevis AAH73435 I 0.903
AAH80020 Xenopus laevis AAH80020 I 0.756
AAI08463 Xenopus laevis AAI08463 I 0.828
AAK29408 Xenopus laevis AAK29408 I 0.756
CAA40721 Xenopus laevis CAA40721 I 0.832
P20965 Xenopus laevis P20965 I 0.832
Q6GR16 Xenopus laevis Q6GR16 I 0.763
Q6IP09 Xenopus laevis Q6IP09 I 0.828
BGIBMGA003469 Bombyx mori BGIBMGA003469 I 0.714
gw.1.65.1 Branchiostoma floridae gw.1.65.1 I 0.707
PABPC3 Tetraodon nigroviridis ENSTNIG00000013307 I 0.786
PABPC4 Tetraodon nigroviridis ENSTNIG00000016902 I 0.892
ENSTRUG00000003767 Takifugu rubripes ENSTRUG00000003767 I 0.806
Q8QGJ7_FUGRU Takifugu rubripes ENSTRUG00000005907 I 0.896
PABPC1L Takifugu rubripes ENSTRUG00000011085 I 0.735
PABPC3 Takifugu rubripes ENSTRUG00000011577 I 0.814
ENSTSYG00000004229 Tarsius syrichta ENSTSYG00000004229 I 0.828
PABPC1L Tarsius syrichta ENSTSYG00000006645 I 0.710
ENSTTRG00000004689 Tursiops truncatus ENSTTRG00000004689 I 0.835
pabpc1 Xenopus tropicalis ENSXETG00000006635 I 0.835
pabpc4 Xenopus tropicalis ENSXETG00000010946 I 0.835
pabpc1l Xenopus tropicalis ENSXETG00000022831 I 0.742
ISCW014211 Ixodes scapularis ISCW014211 I 0.715
PHUM617090 Pediculus humanus PHUM617090 I 0.710
e_gw.313.40.1 Branchiostoma floridae e_gw.313.40.1 I 0.707
Q98SP8 Xenopus laevis Q98SP8 I 0.756
CpipJ_CPIJ007980 Culex pipiens CpipJ_CPIJ007980 I 0.717
PABPC1L Cavia porcellus ENSCPOG00000013633 I 0.710
pabpc1l Danio rerio ENSDARG00000002597 I 0.738
pabpc1a Danio rerio ENSDARG00000017219 I 0.810
pabpc1b Danio rerio ENSDARG00000021140 I 0.793
pabpc4 Danio rerio ENSDARG00000059259 I 0.903
LOC100054235 Equus caballus ENSECAG00000009396 I 0.875
LOC100056021 Equus caballus ENSECAG00000020699 I 0.808
LOC100070836 Equus caballus ENSECAG00000022681 I 0.720
PABPC4 Erinaceus europaeus ENSEEUG00000002962 I 0.864
PABPC1L Erinaceus europaeus ENSEEUG00000005978 I 0.713
PABPC1L Homo sapiens ENSG00000101104 I 0.713
ENSG00000250177 Homo sapiens ENSG00000250177 I 0.707
PABPC1L Gasterosteus aculeatus ENSGACG00000002792 I 0.742
PABPC3 Gasterosteus aculeatus ENSGACG00000003572 I 0.806
ENSGACG00000003771 Gasterosteus aculeatus ENSGACG00000003771 I 0.781
PABPC4 Cavia porcellus ENSCPOG00000009552 I 0.878
LOC100411130 Callithrix jacchus ENSCJAG00000018953 I 0.806
amel4_ncbi_hmm1364 Apis mellifera amel4_ncbi_hmm1364 I 0.707
amel4_ncbi_hmm1700 Apis mellifera amel4_ncbi_hmm1700 I 0.707
amel4_ncbi_hmm2036 Apis mellifera amel4_ncbi_hmm2036 I 0.707
AAEL010318 Aedes aegypti AAEL010318 I 0.714
CPIJ007980 Culex quinquefasciatus CPIJ007980 I 0.717
PABPC1L Anolis carolinensis ENSACAG00000011841 I 0.767
ENSACAG00000016470 Anolis carolinensis ENSACAG00000016470 I 0.839
PABPC1L Bos taurus ENSBTAG00000016849 I 0.731
A4IFC3_BOVIN Bos taurus ENSBTAG00000017125 I 0.875
ENSCAFG00000000567 Canis familiaris ENSCAFG00000000567 I 0.835
PABPC4 Canis familiaris ENSCAFG00000003081 I 0.875
PABPC1L Canis familiaris ENSCAFG00000009573 I 0.720
A6MKJ4_CALJA Callithrix jacchus ENSCJAG00000002512 I 0.875
LOC100413032 Callithrix jacchus ENSCJAG00000015833 I 0.873
PABPC1L Callithrix jacchus ENSCJAG00000017628 I 0.703
PABPC4 Gasterosteus aculeatus ENSGACG00000007179 I 0.885
PABPC4 Gallus gallus ENSGALG00000003800 I 0.932
XR_030308.1 Monodelphis domestica ENSMODG00000006222 I 0.832
ENSMODG00000012040 Monodelphis domestica ENSMODG00000012040 I 0.737
XM_001373066.1 Monodelphis domestica ENSMODG00000013156 I 0.738
PABPC1L Monodelphis domestica ENSMODG00000016198 I 0.749
XM_001367383.1 Monodelphis domestica ENSMODG00000017105 I 0.810
XM_001365232.1 Monodelphis domestica ENSMODG00000017657 I 0.918
Pabpc4 Mus musculus ENSMUSG00000011257 I 0.857
Pabpc1 Mus musculus ENSMUSG00000022283 I 0.839
Pabpc6 Mus musculus ENSMUSG00000046173 I 0.781
Pabpc2 Mus musculus ENSMUSG00000051732 I 0.781
Gm10110 Mus musculus ENSMUSG00000062093 I 0.860
ENSOANG00000007307 Ornithorhynchus anatinus ENSOANG00000007307 I 0.839
ENSOANG00000010001 Ornithorhynchus anatinus ENSOANG00000010001 I 0.924
PABPC4 Oryctolagus cuniculus ENSOCUG00000000562 I 0.871
PABPC3 Macaca mulatta ENSMMUG00000020835 I 0.792
PABPC1 Macaca mulatta ENSMMUG00000017786 I 0.835
PABPC1L Macaca mulatta ENSMMUG00000013209 I 0.717
PABPC1L Gallus gallus ENSGALG00000004123 I 0.792
PABPC4 Gorilla gorilla ENSGGOG00000004002 I 0.875
PABPC1L Gorilla gorilla ENSGGOG00000004584 I 0.713
Q2VIP1_9PRIM Gorilla gorilla ENSGGOG00000006785 I 0.708
PABPC4 Loxodonta africana ENSLAFG00000000151 I 0.875
PABPC1L Loxodonta africana ENSLAFG00000003553 I 0.728
ENSLAFG00000013994 Loxodonta africana ENSLAFG00000013994 I 0.835
PABPC1L Macropus eugenii ENSMEUG00000007905 I 0.731
PABPC1L Meleagris gallopavo ENSMGAG00000003674 I 0.796
ENSMICG00000000431 Microcebus murinus ENSMICG00000000431 I 0.875
PABPC1L Microcebus murinus ENSMICG00000000974 I 0.720
ENSMICG00000016633 Microcebus murinus ENSMICG00000016633 I 0.835
ENSMLUG00000012245 Myotis lucifugus ENSMLUG00000012245 I 0.714
PABPC4 Macaca mulatta ENSMMUG00000007497 I 0.875
PABPC1L Oryctolagus cuniculus ENSOCUG00000003005 I 0.738
ENSMODG00000018051 Monodelphis domestica ENSMODG00000018051 N 0.733