CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Q2KIJ3_BOVIN
(
Bos taurus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSBTAG00000018613
T34898_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSBTAP00000024770
RRM
10
83
LFVGGLGQNISEADLQNQFGRFGEVSDVEIITRKDDQGNPQKVFAYINIRVTEADLKKCMSVLNKTKWKGGTLQ
Links
Other
RRM
family RBPs
Other
Bos taurus
RBPs
22 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
NOL8
Canis familiaris
ENSCAFG00000002324
N
0.757
NOL8
Otolemur garnettii
ENSOGAG00000015009
N
0.865
NOL8
Ochotona princeps
ENSOPRG00000003268
N
0.784
ENSPPYG00000019375
Pongo pygmaeus
ENSPPYG00000019375
N
0.919
XR_023129.1
Pan troglodytes
ENSPTRG00000021109
N
0.919
NOL8
Sorex araneus
ENSSARG00000010607
N
0.878
NOL8
Sus scrofa
ENSSSCG00000008069
N
0.932
NOL8
Spermophilus tridecemlineatus
ENSSTOG00000015195
N
0.919
NOL8
Tupaia belangeri
ENSTBEG00000014187
N
0.959
NOL8
Tursiops truncatus
ENSTTRG00000008244
N
0.919
NOL8
Oryctolagus cuniculus
ENSOCUG00000008053
N
0.919
Nol8
Mus musculus
ENSMUSG00000021392
N
0.905
A6MJU4_CALJA
Callithrix jacchus
ENSCJAG00000020481
N
0.867
NOL8
Cavia porcellus
ENSCPOG00000027360
N
0.853
NOL8
Dasypus novemcinctus
ENSDNOG00000019774
N
0.709
NOL8
Felis catus
ENSFCAG00000000818
N
0.759
NOL8
Homo sapiens
ENSG00000198000
N
0.919
NOL8
Loxodonta africana
ENSLAFG00000002184
N
0.892
NOL8
Microcebus murinus
ENSMICG00000014322
N
0.784
NOL8
Myotis lucifugus
ENSMLUG00000015204
N
0.878
NOL8
Macaca mulatta
ENSMMUG00000004629
N
0.932
Ame_R016320
Ailuropoda melanoleuca
Ame_R016320
N
0.932