LOC100397230 (Callithrix jacchus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSCJAG00000008744 T35555_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000016059 RRM 16 85

Links

Other RRM family RBPs
Other Callithrix jacchus RBPs

5 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_00049 Chaetomium globosum CHGG_00049 N 0.000
estExt_Genewise1Plus.C_130028 Neurospora discreta estExt_Genewise1Plus.C_130028 N 0.000
gw1.28.197.1 Nectria haematococca gw1.28.197.1 N 0.000
Scas_Contig567.6 Saccharomyces castellii Scas_Contig567.6 N 0.000
22086_YPL054W Saccharomyces mikatae 22086_YPL054W N 0.000
25080_YPL054W Saccharomyces bayanus 25080_YPL054W N 0.000
A7TTU4_VANPO Vanderwaltozyma polyspora A7TTU4_VANPO N 0.000
ADR062W Ashbya gossypii ADR062W N 0.000
Cd36_85970 Candida dubliniensis Cd36_85970 N 0.000
e_gw1.10.437.1 Cryphonectria parasitica e_gw1.10.437.1 N 0.000
KLLA0B09878g Kluyveromyces lactis KLLA0B09878g N 0.000
Pa_5_7490 Podospora anserina Pa_5_7490 N 0.000
SAKL0H10846g Lachancea kluyveri SAKL0H10846g N 0.000
estExt_Genewise1.C_81229 Thielavia terrestris estExt_Genewise1.C_81229 N 0.000
estExt_Genewise1.C_60695 Trichoderma atroviride estExt_Genewise1.C_60695 N 0.000
CPAG_02338 Candida parapsilosis CPAG_02338 N 0.000
DEHA0D17303g Debaryomyces hansenii DEHA0D17303g N 0.000
GLRG_01727 Colletotrichum graminicola GLRG_01727 N 0.000
MGG_03480 Magnaporthe oryzae MGG_03480 N 0.000
orf19.7385 Candida albicans orf19.7385 N 0.000
NCU05007 Neurospora crassa NCU05007 N 0.000
LEE1 Saccharomyces cerevisiae YPL054W N 0.000
augustus-scaffold_9.g315 Schizophyllum commune augustus-scaffold_9.g315 N 0.000
e_gw1.29.29.1 Trichoderma virens e_gw1.29.29.1 N 0.000
e_gwh1.2.1.2495.1 Pichia stipitis e_gwh1.2.1.2495.1 N 0.000
estExt_fgenesh5_pg.C_100355 Trichoderma reesei estExt_fgenesh5_pg.C_100355 N 0.000
estExt_Genewise1.C_110035 Neurospora tetrasperma estExt_Genewise1.C_110035 N 0.000
ZYRO0F08690g Zygosaccharomyces rouxii ZYRO0F08690g N 0.000