CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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ESRP2
(
Erinaceus europaeus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSEEUG00000014033
T36840_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
ESRP2
M141_0.6
Homo sapiens
UGGGRAD
RNAcompete
Ray et al.(2013)
RNCMPT00150
0.958
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSEEUP00000012813
RRM
182
250
VRARGLPWQSSDQDVARFFKGLNIARGGVALCLNAQGRRNGEALIRFVDSEQRDLALRRHKHHMGVRYI
ENSEEUP00000012813
RRM
309
355
GGADGLLFVRHPDGRPTGDAFALFACEELAQAALRRHKGMLGKRYIE
ENSEEUP00000012813
RRM
400
472
VRLRGLPYTATIEDILSFLGEAAADIRPHGVHMVLNQQGRPSGDAFIQMTSAERALAAAQRCHKKMMKERYVE
Links
Other
RRM
family RBPs
Other
Erinaceus europaeus
RBPs
59 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
ESRP2
Homo sapiens
ENSG00000103067
D
0.958
Ame_R015210
Ailuropoda melanoleuca
Ame_R015210
I
0.713
ENSPPYG00000007484
Pongo pygmaeus
ENSPPYG00000007484
I
0.969
ESRP2
Procavia capensis
ENSPCAG00000005215
I
0.865
ESRP2
Ochotona princeps
ENSOPRG00000013401
I
0.859
ESRP1
Oryctolagus cuniculus
ENSOCUG00000001316
I
0.718
ESRP2
Oryctolagus cuniculus
ENSOCUG00000001242
I
0.974
ESRP2
Ornithorhynchus anatinus
ENSOANG00000010972
I
0.750
ESRP1
Ornithorhynchus anatinus
ENSOANG00000004746
I
0.713
Esrp2
Mus musculus
ENSMUSG00000084128
I
0.984
Esrp1
Mus musculus
ENSMUSG00000040728
I
0.704
ESRP1
Monodelphis domestica
ENSMODG00000007268
I
0.704
ESRP2
Monodelphis domestica
ENSMODG00000005183
I
0.763
ESRP2
Macaca mulatta
ENSMMUG00000021846
I
0.963
ENSPPYG00000018753
Pongo pygmaeus
ENSPPYG00000018753
I
0.718
ESRP2
Pan troglodytes
ENSPTRG00000008261
I
0.969
Ame_R011562
Ailuropoda melanoleuca
Ame_R011562
I
0.984
ESRP1
Vicugna pacos
ENSVPAG00000006566
I
0.718
ESRP2
Tursiops truncatus
ENSTTRG00000014613
I
0.979
ESRP1
Tursiops truncatus
ENSTTRG00000004226
I
0.716
ESRP1
Tarsius syrichta
ENSTSYG00000006036
I
0.713
RBM35B
Taeniopygia guttata
ENSTGUG00000006986
I
0.708
ESRP1
Sus scrofa
ENSSSCG00000006099
I
0.713
ESRP2
Sorex araneus
ENSSARG00000014176
I
0.860
Esrp2
Rattus norvegicus
ENSRNOG00000023177
I
0.851
RGD1560481
Rattus norvegicus
ENSRNOG00000008184
I
0.708
ESRP2
Pteropus vampyrus
ENSPVAG00000016626
I
0.911
ESRP1
Pteropus vampyrus
ENSPVAG00000014513
I
0.713
ESRP1
Pan troglodytes
ENSPTRG00000020430
I
0.718
ESRP1
Macaca mulatta
ENSMMUG00000021112
I
0.708
ESRP2
Myotis lucifugus
ENSMLUG00000005934
I
0.865
ESRP1
Equus caballus
ENSECAG00000000784
I
0.713
Esrp2
Dipodomys ordii
ENSDORG00000000665
I
0.833
ESRP2
Dasypus novemcinctus
ENSDNOG00000018588
I
0.850
esrp2
Danio rerio
ENSDARG00000018814
I
0.704
ESRP1
Cavia porcellus
ENSCPOG00000012197
I
0.713
LOC100388530
Callithrix jacchus
ENSCJAG00000015709
I
0.963
LOC100386717
Callithrix jacchus
ENSCJAG00000000043
I
0.718
ESRP2
Canis familiaris
ENSCAFG00000020320
I
0.984
ESRP1
Canis familiaris
ENSCAFG00000009305
I
0.713
LOC788414
Bos taurus
ENSBTAG00000021838
I
0.713
ESRP2
Bos taurus
ENSBTAG00000004375
I
0.984
ESRP2
Anolis carolinensis
ENSACAG00000009900
I
0.708
LOC100066567
Equus caballus
ENSECAG00000017375
I
0.979
ESRP1
Erinaceus europaeus
ENSEEUG00000001673
I
0.704
ESRP2
Echinops telfairi
ENSETEG00000006068
I
0.879
ESRP2
Microcebus murinus
ENSMICG00000011382
I
0.963
ESRP1
Microcebus murinus
ENSMICG00000008757
I
0.713
ESRP2
Meleagris gallopavo
ENSMGAG00000003943
I
0.718
ESRP2
Macropus eugenii
ENSMEUG00000014322
I
0.787
ESRP2
Loxodonta africana
ENSLAFG00000014609
I
0.846
ESRP1
Loxodonta africana
ENSLAFG00000001498
I
0.713
ESRP2
Gorilla gorilla
ENSGGOG00000010150
I
0.958
ESRP1
Gorilla gorilla
ENSGGOG00000003627
I
0.718
ESRP2_CHICK
Gallus gallus
ENSGALG00000003374
I
0.718
ESRP1
Homo sapiens
ENSG00000104413
I
0.718
ESRP2
Felis catus
ENSFCAG00000010419
I
0.984
ESRP1
Felis catus
ENSFCAG00000009920
I
0.713
ESRP1
Anolis carolinensis
ENSACAG00000003748
I
0.708