CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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G3BP2
(
Echinops telfairi
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSETEG00000016219
T36991_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
G3BP2
M021_0.6
Homo sapiens
AGGAUDR
RNAcompete
Ray et al.(2013)
RNCMPT00021
0.955
For this family, RBPs with RBD identity >
0.7
will likely have a similar motif
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSETEP00000013145
RRM
332
398
LFVGNLPHDIDENELKEFFMSFGNVVELRINTKGVGGKLPNFGFVVFDDSEPVQRILIAKTIKFREE
Links
Other
RRM
family RBPs
Other
Echinops telfairi
RBPs
53 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
G3BP2
Homo sapiens
ENSG00000138757
D
0.955
ENSRNOG00000001595
Rattus norvegicus
ENSRNOG00000001595
I
0.851
G3BP2
Pteropus vampyrus
ENSPVAG00000010166
I
0.955
G3BP2
Pan troglodytes
ENSPTRG00000016175
I
0.955
ENSPPYG00000014846
Pongo pygmaeus
ENSPPYG00000014846
I
0.955
G3BP2
Procavia capensis
ENSPCAG00000015109
I
0.955
G3BP1
Oryzias latipes
ENSORLG00000011422
I
0.716
G3BP2
Oryzias latipes
ENSORLG00000007012
I
0.881
G3BP2
Ochotona princeps
ENSOPRG00000006307
I
0.955
G3BP2
Otolemur garnettii
ENSOGAG00000000157
I
0.955
G3BP2
Oryctolagus cuniculus
ENSOCUG00000003262
I
0.955
G3BP1
Ornithorhynchus anatinus
ENSOANG00000005110
I
0.716
AAH76729
Xenopus laevis
AAH76729
I
0.821
G3bp2
Rattus norvegicus
ENSRNOG00000002433
I
0.955
G3BP2
Sorex araneus
ENSSARG00000009503
I
0.955
Ame_R007258
Ailuropoda melanoleuca
Ame_R007258
I
0.955
g3bp2
Xenopus tropicalis
ENSXETG00000000334
I
0.866
G3BP2
Vicugna pacos
ENSVPAG00000010710
I
0.955
G3BP2
Tursiops truncatus
ENSTTRG00000013795
I
0.940
G3BP2
Takifugu rubripes
ENSTRUG00000011405
I
0.881
G3BP1
Tetraodon nigroviridis
ENSTNIG00000012954
I
0.701
G3BP2
Tetraodon nigroviridis
ENSTNIG00000011044
I
0.866
G3BP2
Taeniopygia guttata
ENSTGUG00000001561
I
0.925
G3BP1
Taeniopygia guttata
ENSTGUG00000000753
I
0.716
ENSTBEG00000012323
Tupaia belangeri
ENSTBEG00000012323
I
0.955
ENSTBEG00000008258
Tupaia belangeri
ENSTBEG00000008258
I
0.940
ENSOANG00000004714
Ornithorhynchus anatinus
ENSOANG00000004714
I
0.940
G3bp2
Mus musculus
ENSMUSG00000029405
I
0.955
G3BP2
Equus caballus
ENSECAG00000007917
I
0.955
G3bp2
Dipodomys ordii
ENSDORG00000004825
I
0.955
G3BP2
Dasypus novemcinctus
ENSDNOG00000012491
I
0.925
G3BP2
Danio rerio
ENSDARG00000074572
I
0.866
g3bp2
Danio rerio
ENSDARG00000014790
I
0.836
ENSDARG00000011704
Danio rerio
ENSDARG00000011704
I
0.866
G3BP2
Cavia porcellus
ENSCPOG00000012052
I
0.955
LOC100413275
Callithrix jacchus
ENSCJAG00000019897
I
0.955
G3BP2
Choloepus hoffmanni
ENSCHOG00000005346
I
0.925
G3BP2
Canis familiaris
ENSCAFG00000008371
I
0.955
Q2KJ17_BOVIN
Bos taurus
ENSBTAG00000014041
I
0.955
G3BP2
Erinaceus europaeus
ENSEEUG00000013436
I
0.955
G3BP2
Felis catus
ENSFCAG00000010124
I
0.955
G3BP2
Monodelphis domestica
ENSMODG00000019205
I
0.940
G3BP2
Macaca mulatta
ENSMMUG00000002153
I
0.955
G3BP2
Myotis lucifugus
ENSMLUG00000004753
I
0.955
G3BP2
Microcebus murinus
ENSMICG00000007795
I
0.955
G3BP2
Meleagris gallopavo
ENSMGAG00000007221
I
0.925
G3BP1
Meleagris gallopavo
ENSMGAG00000005963
I
0.716
G3BP2
Macropus eugenii
ENSMEUG00000004126
I
0.940
G3BP2
Loxodonta africana
ENSLAFG00000023321
I
0.955
G3BP2
Gorilla gorilla
ENSGGOG00000014947
I
0.955
G3BP2
Gallus gallus
ENSGALG00000010882
I
0.925
G3BP2
Gasterosteus aculeatus
ENSGACG00000017342
I
0.851
G3BP2
Anolis carolinensis
ENSACAG00000008695
I
0.925