CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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CELF5
(
Ornithorhynchus anatinus
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSOANG00000009501
T39521_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSOANP00000015090
RRM
22
87
LFVGMLNKQQSEEDVLRLFQPFGVIDECTVLRGPDGNSKGCAFVKFSSHTEAQAAIHALHGSQTMP
Links
Other
RRM
family RBPs
Other
Ornithorhynchus anatinus
RBPs
7 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
fne
Drosophila melanogaster
FBgn0086675
D
0.000
AAEL006675
Aedes aegypti
AAEL006675
I
0.000
GM11591
Drosophila sechellia
FBgn0166534
I
0.000
GJ16518
Drosophila virilis
FBgn0203702
I
0.000
GK25647
Drosophila willistoni
FBgn0227606
I
0.000
GA22283-RA
Drosophila pseudoobscura
FBgn0243690
I
0.000
PHUM065370
Pediculus humanus
PHUM065370
I
0.000
BGIBMGA013823
Bombyx mori
BGIBMGA013823
I
0.000
AAH43735
Xenopus laevis
AAH43735
I
0.000
AAH56021
Xenopus laevis
AAH56021
I
0.000
GL22975
Drosophila persimilis
FBgn0160565
I
0.000
GI16282
Drosophila mojavensis
FBgn0139031
I
0.000
GH24423
Drosophila grimshawi
FBgn0131879
I
0.000
AAEL008516
Aedes aegypti
AAEL008516
I
0.000
AAEL010567
Aedes aegypti
AAEL010567
I
0.000
AGAP009952
Anopheles gambiae
AGAP009952
I
0.000
ELAVL4
Oryzias latipes
ENSORLG00000017130
I
0.000
elavl4
Xenopus tropicalis
ENSXETG00000008680
I
0.000
fne
Drosophila yakuba
FBgn0067971
I
0.000
GF21392
Drosophila ananassae
FBgn0098394
I
0.000
GG17743
Drosophila erecta
FBgn0109965
I
0.000
Q7SZT7
Xenopus laevis
Q7SZT7
I
0.000