CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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RDM1
(
Pan troglodytes
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
ENSPTRG00000009031
T40685_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000015408
RRM
27
90
TAEALHHSLFTAFSQFGLLYSVRVFPNAAVAHPGFYAVIKFYSARAAHRAQKACDRKQLFQKSP
ENSPTRP00000058314
RRM
8
68
PQHSLFTAFSQFGLLYSVRVFPNAAVAHPGFYAVIKFYSARAAHRAQKACDRKQLFQKSPV
Links
Other
RRM
family RBPs
Other
Pan troglodytes
RBPs
23 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PDCD11
Cavia porcellus
ENSCPOG00000010957
N
0.000
PDCD11
Pan troglodytes
ENSPTRG00000002911
N
0.000
PDCD11
Oryctolagus cuniculus
ENSOCUG00000006312
N
0.000
Pdcd11
Mus musculus
ENSMUSG00000025047
N
0.000
PDCD11
Macaca mulatta
ENSMMUG00000007058
N
0.000
PDCD11
Gorilla gorilla
ENSGGOG00000011621
N
0.000
PDCD11
Homo sapiens
ENSG00000148843
N
0.000
PDCD11
Felis catus
ENSFCAG00000002384
N
0.000
Q6X9W2_HORSE
Equus caballus
ENSECAG00000020507
N
0.000
Pdcd11
Rattus norvegicus
ENSRNOG00000020304
N
0.000