CPEB3 (Vicugna pacos)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 ENSVPAG00000002144 T42711_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
CPEB4
M149_0.6 		Homo sapiens UUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00158 		0.745
CPEB2
M012_0.6 		Homo sapiens CHUUUUU RNAcompete
Ray et al.(2013)
RNCMPT00012 		0.730
orb2
M120_0.6 		Drosophila melanogaster KUUUKKK RNAcompete
Ray et al.(2013)
RNCMPT00126 		0.708
For this family, RBPs with RBD identity > 0.7 will likely have a similar motif

RNA Binding Domains

Protein ID Domain From To Sequence
ENSVPAP00000001980 RRM 445 481
ENSVPAP00000001980 RRM 553 622

Links

Other RRM family RBPs
Other Vicugna pacos RBPs

136 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
Cpeb3 Mus musculus ENSMUSG00000039652 I 0.774
CPEB3 Dasypus novemcinctus ENSDNOG00000013705 N 0.000
CPEB2 Echinops telfairi ENSETEG00000018238 N 0.000
CPEB2 Spermophilus tridecemlineatus ENSSTOG00000002388 N 0.000
Smp_136410 Schistosoma mansoni Smp_136410 N 0.000