estExt_gwp.C_3900044 (Branchiostoma floridae)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 estExt_gwp.C_3900044 T51590_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
estExt_gwp.C_3900044 RRM 135 204
estExt_gwp.C_3900044 RRM 237 309
estExt_gwp.C_3900044 RRM 355 427

Links

Other RRM family RBPs
Other Branchiostoma floridae RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC788414 Bos taurus ENSBTAG00000021838 I 0.704
ESRP1 Oryctolagus cuniculus ENSOCUG00000001316 I 0.708
ENSPPYG00000018753 Pongo pygmaeus ENSPPYG00000018753 I 0.708
ESRP1 Pan troglodytes ENSPTRG00000020430 I 0.708
ESRP1 Pteropus vampyrus ENSPVAG00000014513 I 0.704
RGD1560481 Rattus norvegicus ENSRNOG00000008184 I 0.704
ESRP1 Sus scrofa ENSSSCG00000006099 I 0.704
ESRP1 Tursiops truncatus ENSTTRG00000004226 I 0.704
ESRP1 Vicugna pacos ENSVPAG00000006566 I 0.708
esrp1 Xenopus tropicalis ENSXETG00000014667 I 0.713
Ame_R015210 Ailuropoda melanoleuca Ame_R015210 I 0.704
AAH44002 Xenopus laevis AAH44002 I 0.713
ESRP1 Ornithorhynchus anatinus ENSOANG00000004746 I 0.704
Esrp1 Mus musculus ENSMUSG00000040728 I 0.704
ESRP1 Canis familiaris ENSCAFG00000009305 I 0.704
LOC100386717 Callithrix jacchus ENSCJAG00000000043 I 0.708
ESRP1 Cavia porcellus ENSCPOG00000012197 I 0.704
ESRP1 Equus caballus ENSECAG00000000784 I 0.704
ESRP1 Felis catus ENSFCAG00000009920 I 0.704
ESRP1 Homo sapiens ENSG00000104413 I 0.708
ESRP1 Gorilla gorilla ENSGGOG00000003627 I 0.708
ESRP1 Loxodonta africana ENSLAFG00000001498 I 0.704
ESRP1 Microcebus murinus ENSMICG00000008757 I 0.704
ESRP1 Macaca mulatta ENSMMUG00000021112 I 0.704
ESRP1 Monodelphis domestica ENSMODG00000007268 I 0.704
Q7ZY29 Xenopus laevis Q7ZY29 I 0.713
estExt_gwp.C_3900052 Branchiostoma floridae estExt_gwp.C_3900052 N 1.000