fgenesh1_pg.sca_3_chr4_2_0000797 (Nectria haematococca)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pg.sca_3_chr4_2_0000797 T51986_0.6 JGI (2010-Jan-8)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.sca_3_chr4_2_0000797 RRM 421 483

Links

Other RRM family RBPs
Other Nectria haematococca RBPs

12 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_03190 Chaetomium globosum CHGG_03190 N 0.734
fgenesh1_pm.C_scaffold_1000573 Trichoderma atroviride fgenesh1_pm.C_scaffold_1000573 N 0.810
fgenesh1_pg.C_scaffold_7000213 Trichoderma virens fgenesh1_pg.C_scaffold_7000213 N 0.841
estExt_fgenesh3_kg.C_50040 Neurospora discreta estExt_fgenesh3_kg.C_50040 N 0.734
estExt_fgenesh2_pg.C_30224 Thielavia terrestris estExt_fgenesh2_pg.C_30224 N 0.797
estExt_fgenesh1_pm.C_90056 Trichoderma reesei estExt_fgenesh1_pm.C_90056 N 0.810
NCU07574 Neurospora crassa NCU07574 N 0.734
GLRG_00126 Colletotrichum graminicola GLRG_00126 N 0.778
FVEG_05401 Fusarium verticillioides FVEG_05401 N 0.719
FOXG_02229 Fusarium oxysporum FOXG_02229 N 0.734
FGSG_06706 Fusarium graminearum FGSG_06706 N 0.889
Pa_7_7110 Podospora anserina Pa_7_7110 N 0.734