CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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AB02127.1
(
Alternaria brassicicola
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
AB02127.1
T55392_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB02127.1
RRM
678
742
LYLGNLPRNATKADVEGHFQTHGTGEITEIKLMNGFGFIEYKDAMDARDVVPAFHGSDFMGERLI
AB02127.1
RRM
773
839
MRIANLPVETSWQDLKDFARQSGLDVVYSEVGRERDGTGFVEYETAADLKTAVEKLDRREFKGQEVT
Links
Other
RRM
family RBPs
Other
Alternaria brassicicola
RBPs
32 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PK11843.1
Cannabis sativa
PK11843.1
N
0.000
BRADI2G57887
Brachypodium distachyon
BRADI2G57887
N
0.000
LOC_Os01g67570
Oryza sativa
LOC_Os01g67570
N
0.000
Cucsa.157490
Cucumis sativus
Cucsa.157490
N
0.000
mgf006313m
Mimulus guttatus
mgf006313m
N
0.000
MDP0000294429
Malus x domestica
MDP0000294429
N
0.000
ppa002434m
Prunus persica
ppa002434m
N
0.000