fgenesh1_pm.C_scaffold_4000122 (Pleurotus ostreatus)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 fgenesh1_pm.C_scaffold_4000122 T56600_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pm.C_scaffold_4000122 RRM 9 79

Links

Other RRM family RBPs
Other Pleurotus ostreatus RBPs

11 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CNBG_0311 Cryptococcus neoformans CNBG_0311 N 0.732
estExt_Genewise1.C_41157 Heterobasidion annosum estExt_Genewise1.C_41157 N 0.889
estExt_fgenesh2_kg.C_40535 Agaricus bisporus estExt_fgenesh2_kg.C_40535 N 0.958
e_gw1.3.1050.1 Tremella mesenterica e_gw1.3.1050.1 N 0.708
fgenesh3_pg.89__57 Postia placenta fgenesh3_pg.89__57 N 0.873
estExt_Genewise1Plus.C_11839 Schizophyllum commune estExt_Genewise1Plus.C_11839 N 0.887
estExt_Genewise1.C_80010 Melampsora laricis populina estExt_Genewise1.C_80010 N 0.718
e_gwh1.25.133.1 Laccaria bicolor e_gwh1.25.133.1 N 0.903
PTTG_06790 Puccinia triticina PTTG_06790 N 0.718
PGTG_06023 Puccinia graminis PGTG_06023 N 0.718
Genemark.3378_g Serpula lacrymans Genemark.3378_g N 0.944