PGTG_06023 (Puccinia graminis)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 PGTG_06023 T29998_0.6 Broad (2011-Oct-27)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PGTT_06023 RRM 64 134

Links

Other RRM family RBPs
Other Puccinia graminis RBPs

14 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
PTTG_06790 Puccinia triticina PTTG_06790 N 1.000
estExt_Genewise1.C_80010 Melampsora laricis populina estExt_Genewise1.C_80010 N 0.972
e_gw1.3.1050.1 Tremella mesenterica e_gw1.3.1050.1 N 0.792
CNBG_0311 Cryptococcus neoformans CNBG_0311 N 0.789
estExt_fgenesh1_pg.C_30402 Sporobolomyces roseus estExt_fgenesh1_pg.C_30402 N 0.789
fgenesh3_pg.89__57 Postia placenta fgenesh3_pg.89__57 N 0.761
e_gwh1.25.133.1 Laccaria bicolor e_gwh1.25.133.1 N 0.736
estExt_Genewise1.C_41157 Heterobasidion annosum estExt_Genewise1.C_41157 N 0.736
Genemark.3378_g Serpula lacrymans Genemark.3378_g N 0.732
UM01325 Ustilago maydis UM01325 N 0.718
fgenesh1_pm.C_scaffold_4000122 Pleurotus ostreatus fgenesh1_pm.C_scaffold_4000122 N 0.718
estExt_fgenesh2_kg.C_40535 Agaricus bisporus estExt_fgenesh2_kg.C_40535 N 0.718
estExt_Genewise1Plus.C_11839 Schizophyllum commune estExt_Genewise1Plus.C_11839 N 0.718
CNBG_1505 Cryptococcus neoformans CNBG_1505 N 0.704