CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Pa_4_2600
(
Podospora anserina
)
RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00076 (RRM_1)
IPR000504
Pa_4_2600
T57927_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pa_4_2600
RRM
74
143
VFVGNVDYSASPEELQSHFGDCGSINRVTILLDKFTGQPKGYAYVEFSEPNMVAQALVLNDSLFKGRNIK
Links
Other
RRM
family RBPs
Other
Podospora anserina
RBPs
50 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BRADI3G26697
Brachypodium distachyon
BRADI3G26697
N
0.000
LOC_Os10g27470
Oryza sativa
LOC_Os10g27470
N
0.000
SB01G022040
Sorghum bicolor
Sb01g022040
N
0.000