Pa_4_2600 (Podospora anserina)
RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00076 (RRM_1) IPR000504 Pa_4_2600 T57927_0.6 Superfamily (2011-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Pa_4_2600 RRM 74 143

Links

Other RRM family RBPs
Other Podospora anserina RBPs

50 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CHGG_08656 Chaetomium globosum CHGG_08656 N 0.900
estExt_fgenesh1_kg.C_50066 Myceliophthora thermophila estExt_fgenesh1_kg.C_50066 N 0.886
estExt_fgenesh2_kg.C_50198 Thielavia terrestris estExt_fgenesh2_kg.C_50198 N 0.886
GLRG_10164 Colletotrichum graminicola GLRG_10164 N 0.831
FVEG_02944 Fusarium verticillioides FVEG_02944 N 0.831
e_gw1.5.977.1 Nectria haematococca e_gw1.5.977.1 N 0.831
estExt_fgenesh3_kg.C_60298 Neurospora discreta estExt_fgenesh3_kg.C_60298 N 0.831
FOXG_05189 Fusarium oxysporum FOXG_05189 N 0.831
estExt_fgenesh1_pm.C_10632 Trichoderma atroviride estExt_fgenesh1_pm.C_10632 N 0.831
e_gw1.4.511.1 Trichoderma reesei e_gw1.4.511.1 N 0.831
VDAG_00074 Verticillium dahliae VDAG_00074 N 0.831
VDBG_00465 Verticillium albo atrum VDBG_00465 N 0.831
gw1.9.853.1 Trichoderma virens gw1.9.853.1 N 0.831
NCU03946 Neurospora crassa NCU03946 N 0.831
estExt_fgenesh2_kg.C_20042 Neurospora tetrasperma estExt_fgenesh2_kg.C_20042 N 0.831
TERG_02884 Trichophyton rubrum TERG_02884 N 0.817
TESG_01534 Trichophyton tonsurans TESG_01534 N 0.817
MGYG_08646 Microsporum gypseum MGYG_08646 N 0.817
e_gw1.7.1421.1 Cryphonectria parasitica e_gw1.7.1421.1 N 0.817
MGG_07252 Magnaporthe oryzae MGG_07252 N 0.817
estExt_Genewise1Plus.C_chr_120039 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_120039 N 0.803
An08g01040 Aspergillus niger CADANGAG00006423 N 0.803
CIMG_07119 Coccidioides immitis CIMG_07119 N 0.803
CPSG_01188 Coccidioides posadasii CPSG_01188 N 0.803
MCYG_08495 Microsporum canis MCYG_08495 N 0.803
FGSG_10271 Fusarium graminearum FGSG_10271 N 0.803
ANIA_01340 Aspergillus nidulans CADANIAG00001272 N 0.789
fgenesh1_pm.00083_#_765 Aspergillus carbonarius fgenesh1_pm.00083_#_765 N 0.789
NFIA_016120 Neosartorya fischeri CADNFIAG00000670 N 0.789
UREG_05781 Uncinocarpus reesii UREG_05781 N 0.789
BC1G_07056 Botrytis cinerea BC1G_07056 N 0.789
AFUA_1G09490 Aspergillus fumigatus CADAFUAG00007045 N 0.789
SS1G_03706 Sclerotinia sclerotiorum SS1G_03706 N 0.789
ACLA_026010 Aspergillus clavatus CADACLAG00002760 N 0.789
PABG_00587 Paracoccidioides brasiliensis PABG_00587 N 0.775
AO090012000924 Aspergillus oryzae CADAORAG00006445 N 0.775
BDBG_02376 Blastomyces dermatitidis BDBG_02376 N 0.775
Pc16g02770 Penicillium chrysogenum Pc16g02770 N 0.775
PMAA_025390 Penicillium marneffei PMAA_025390 N 0.775
GSTUMT00011743001 Tuber melanosporum GSTUMT00011743001 N 0.761
AB03725.1 Alternaria brassicicola AB03725.1 N 0.718
EAT87520.1 Phaeosphaeria nodorum EAT87520.1 N 0.718
PTRG_03828 Pyrenophora tritici repentis PTRG_03828 N 0.718
SNOG_05129 Stagonospora nodorum SNOG_05129 N 0.718
estExt_Genewise1.C_100240 Cochliobolus heterostrophus C5 estExt_Genewise1.C_100240 N 0.718
SOCG_03627 Schizosaccharomyces octosporus SOCG_03627 N 0.714
SPOG_04110 Schizosaccharomyces cryophilus SPOG_04110 N 0.714
SPPG_00782 Spizellomyces punctatus SPPG_00782 N 0.704
XP_799120.1 Strongylocentrotus purpuratus XP_799120.1 I 0.700
estExt_fgenesh2_pm.C_40328 Serpula lacrymans estExt_fgenesh2_pm.C_40328 N 0.700