CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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gw1.1.76.1
(
Myceliophthora thermophila
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
gw1.1.76.1
T61317_0.6
JGI (2010-Jan-8)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.1.76.1
S1
199
272
TPQLYKIYDGHVTGVKDFGAFVNLHGVRGKIDGLVHISAFGQRVDHPSDVVSKGQKVKVKVIKVEGNRIGLSMK
Links
Other
S1
family RBPs
Other
Myceliophthora thermophila
RBPs
20 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
BC1G_13853
Botrytis cinerea
BC1G_13853
N
0.776
AO090010000458
Aspergillus oryzae
CADAORAG00004519
N
0.724
ATEG_07640
Aspergillus terreus
CADATEAG00000474
N
0.724
NFIA_076400
Neosartorya fischeri
CADNFIAG00008573
N
0.737
NCU06318
Neurospora crassa
NCU06318
N
0.797
estExt_fgenesh1_pg.C_40021
Neurospora tetrasperma
estExt_fgenesh1_pg.C_40021
N
0.811
estExt_fgenesh2_pg.C_30399
Neurospora discreta
estExt_fgenesh2_pg.C_30399
N
0.784
estExt_fgenesh1_pg.C_30380
Cryphonectria parasitica
estExt_fgenesh1_pg.C_30380
N
0.763
Pa_6_9920
Podospora anserina
Pa_6_9920
N
0.824
ANIA_04721
Aspergillus nidulans
CADANIAG00005708
N
0.737
AFUA_5G10830
Aspergillus fumigatus
CADAFUAG00006235
N
0.750
CPSG_07949
Coccidioides posadasii
CPSG_07949
N
0.711
GLRG_07196
Colletotrichum graminicola
GLRG_07196
N
0.750
HCAG_00961
Histoplasma capsulatum
HCAG_00961
N
0.711
MGG_08807
Magnaporthe oryzae
MGG_08807
N
0.776
PABG_04784
Paracoccidioides brasiliensis
PABG_04784
N
0.724
SS1G_13866
Sclerotinia sclerotiorum
SS1G_13866
N
0.789
ACLA_013700
Aspergillus clavatus
CADACLAG00000914
N
0.750
AFLA_119410
Aspergillus flavus
CADAFLAG00012513
N
0.724
Pc21g10420
Penicillium chrysogenum
Pc21g10420
N
0.711