CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Ame_R007841
(
Ailuropoda melanoleuca
)
S1
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00575 (S1)
IPR003029
Ame_R007841
T61466_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ame_R007841
S1
260
335
EPAIGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGTKTSLSMK
Links
Other
S1
family RBPs
Other
Ailuropoda melanoleuca
RBPs
48 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PABPC1
Homo sapiens
ENSG00000070756
D
0.000
ENSACAG00000016470
Anolis carolinensis
ENSACAG00000016470
I
0.000
PABPC3
Oryzias latipes
ENSORLG00000002691
I
0.000
ENSPPYG00000018790
Pongo pygmaeus
ENSPPYG00000018790
I
0.000
XR_023909.1
Pan troglodytes
ENSPTRG00000020475
I
0.000
ENSPVAG00000016640
Pteropus vampyrus
ENSPVAG00000016640
I
0.000
Pabpc1
Rattus norvegicus
ENSRNOG00000008639
I
0.000
ENSSSCG00000006063
Sus scrofa
ENSSSCG00000006063
I
0.000
PABPC1
Taeniopygia guttata
ENSTGUG00000012067
I
0.000
ENSOPRG00000009667
Ochotona princeps
ENSOPRG00000009667
I
0.000
ENSOCUG00000023935
Oryctolagus cuniculus
ENSOCUG00000023935
I
0.000
ENSOCUG00000004354
Oryctolagus cuniculus
ENSOCUG00000004354
I
0.000
ENSOANG00000007307
Ornithorhynchus anatinus
ENSOANG00000007307
I
0.000
Pabpc1
Mus musculus
ENSMUSG00000022283
I
0.000
XR_030308.1
Monodelphis domestica
ENSMODG00000006222
I
0.000
PABPC1
Macaca mulatta
ENSMMUG00000017786
I
0.000
ENSLAFG00000013994
Loxodonta africana
ENSLAFG00000013994
I
0.000
LOC100413032
Callithrix jacchus
ENSCJAG00000015833
I
0.000
ENSCAFG00000000567
Canis familiaris
ENSCAFG00000000567
I
0.000
ENSTTRG00000004689
Tursiops truncatus
ENSTTRG00000004689
I
0.000