CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
Home
Tools
Download cart
Bulk downloads
Database stats
Contact us
Help
How to cite
GL12337
(
Drosophila persimilis
)
CCCH ZF,RRM
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1)
IPR000571
IPR000504
FBgn0149944
T00683_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0176444
CCCH ZF
163
185
HICSFWVKGECKRGEECPYRHDK
FBpp0176444
RRM
234
299
LYVGNLPEEITEPELRDQFYQYGEIRSIALVPRQQCAFVQYTKRSAAELAAERSFNKLVIHGRKVS
Links
Other
CCCH ZF,RRM
family RBPs
Other
Drosophila persimilis
RBPs
24 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
GSVIVG00019958001
Vitis vinifera
GSVIVG00019958001
N
0.000
mgf008188m
Mimulus guttatus
mgf008188m
N
0.000