Medtr3g077080 (Medicago truncatula)
CCCH ZF,RRM

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00642 (zf-CCCH)
PF00076 (RRM_1) 		IPR000571
IPR000504 		Medtr3g077080 T01026_0.6 PlantGDB (2010-Oct-15)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
Medtr3g077080.1 CCCH ZF 174 197
Medtr3g077080.1 RRM 334 394

Links

Other CCCH ZF,RRM family RBPs
Other Medicago truncatula RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
B9IAR9_POPTR Populus trichocarpa POPTR_0014s16340 N 0.701
cassava31399.valid.m1 Manihot esculenta cassava31399.valid.m1 N 0.736
cassava31400.valid.m1 Manihot esculenta cassava31400.valid.m1 N 0.736
cassava36931.valid.m1 Manihot esculenta cassava36931.valid.m1 N 0.701
cassava7063.valid.m1 Manihot esculenta cassava7063.valid.m1 N 0.744
Glyma08g43790.1 Glycine max Glyma08g43790.1 N 0.793
Glyma14g01930.1 Glycine max Glyma14g01930.1 N 0.770
Glyma18g09020.1 Glycine max Glyma18g09020.1 N 0.779
Medtr5g102170 Medicago truncatula Medtr5g102170 N 0.779
ppa019338m Prunus persica ppa019338m N 0.770