PredSwiss_CON369.1 (Pneumocystis carinii)
CCHC ZF,KH

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1) 		IPR001878
IPR018111 		PredSwiss_CON369.1 T07054_0.6 Pneumocystis Genome Project (2010-Oct-5)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PredSwiss_CON369.1 KH 160 232
PredSwiss_CON369.1 CCHC ZF 270 287
PredSwiss_CON369.1 CCHC ZF 295 310

Links

Other CCHC ZF,KH family RBPs
Other Pneumocystis carinii RBPs

7 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
bpb1 Schizosaccharomyces pombe SPCC962.06c N 0.706
FVEG_07538 Fusarium verticillioides FVEG_07538 N 0.734
PABG_02328 Paracoccidioides brasiliensis PABG_02328 N 0.734
PredSwiss_EST660.1 Pneumocystis carinii PredSwiss_EST660.1 N 0.872
SJAG_00249 Schizosaccharomyces japonicus SJAG_00249 N 0.706
TEQG_01541 Trichophyton equinum TEQG_01541 N 0.734
TESG_02440 Trichophyton tonsurans TESG_02440 N 0.734