CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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TEQG_01541
(
Trichophyton equinum
)
CCHC ZF,KH
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
PF00013 (KH_1)
IPR001878
IPR018111
TEQG_01541
T06961_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
TEQG_01541T0
KH
204
273
NLGLLIGPRGNTLKKMETKSGAKIAIRGKGSVKEGKGRSDAAHSSNQEEDLHCLIMADTEDKVNKAKELI
TEQG_01541T0
CCHC ZF
311
328
QACQNCGQIGHRKYDCPE
TEQG_01541T0
CCHC ZF
336
353
IICRVCGNAGHMAKDCPD
Links
Other
CCHC ZF,KH
family RBPs
Other
Trichophyton equinum
RBPs
38 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
TESG_02440
Trichophyton tonsurans
TESG_02440
N
1.000
PABG_02328
Paracoccidioides brasiliensis
PABG_02328
N
0.935
FVEG_07538
Fusarium verticillioides
FVEG_07538
N
0.907
MGYG_01149
Microsporum gypseum
MGYG_01149
N
0.867
TERG_00369
Trichophyton rubrum
TERG_00369
N
0.867
MCYG_00821
Microsporum canis
MCYG_00821
N
0.858
NCU04110
Neurospora crassa
NCU04110
N
0.833
BDBG_03134
Blastomyces dermatitidis
BDBG_03134
N
0.833
CHGG_07335
Chaetomium globosum
CHGG_07335
N
0.833
Pa_2_3850
Podospora anserina
Pa_2_3850
N
0.833
estExt_fgenesh1_pm.C_10341
Neurospora tetrasperma
estExt_fgenesh1_pm.C_10341
N
0.833
GSTUMT00005703001
Tuber melanosporum
GSTUMT00005703001
N
0.825
CPSG_03514
Coccidioides posadasii
CPSG_03514
N
0.825
CIMG_03768
Coccidioides immitis
CIMG_03768
N
0.825
estExt_Genewise1.C_12889
Cryphonectria parasitica
estExt_Genewise1.C_12889
N
0.825
VDAG_04652
Verticillium dahliae
VDAG_04652
N
0.825
VDBG_09415
Verticillium albo atrum
VDBG_09415
N
0.825
FGSG_02080
Fusarium graminearum
FGSG_02080
N
0.824
SNOG_11729
Stagonospora nodorum
SNOG_11729
N
0.819
Pc18g00800
Penicillium chrysogenum
Pc18g00800
N
0.817
estExt_Genewise1Plus.C_22270
Thielavia terrestris
estExt_Genewise1Plus.C_22270
N
0.817
AFLA_031810
Aspergillus flavus
CADAFLAG00002556
N
0.817
ANIA_10615
Aspergillus nidulans
CADANIAG00005496
N
0.817
ACLA_038770
Aspergillus clavatus
CADACLAG00003525
N
0.808
AFUA_3G10840
Aspergillus fumigatus
CADAFUAG00005564
N
0.808
GLRG_01222
Colletotrichum graminicola
GLRG_01222
N
0.808
An02g06570
Aspergillus niger
CADANGAG00002175
N
0.808
NFIA_066410
Neosartorya fischeri
CADNFIAG00006460
N
0.808
estExt_Genewise1Plus.C_chr_50382
Mycosphaerella graminicola
estExt_Genewise1Plus.C_chr_50382
N
0.800
PMAA_023720
Penicillium marneffei
PMAA_023720
N
0.800
MGG_06748
Magnaporthe oryzae
MGG_06748
N
0.800
SS1G_07196
Sclerotinia sclerotiorum
SS1G_07196
N
0.792
BC1G_07392
Botrytis cinerea
BC1G_07392
N
0.792
AB04099.1
Alternaria brassicicola
AB04099.1
N
0.792
EAT80773.2
Phaeosphaeria nodorum
EAT80773.2
N
0.792
PTRG_00022
Pyrenophora tritici repentis
PTRG_00022
N
0.783
PredSwiss_CON369.1
Pneumocystis carinii
PredSwiss_CON369.1
N
0.734
estExt_fgenesh1_pm.C_50279
Schizophyllum commune
estExt_fgenesh1_pm.C_50279
N
0.706