LOC_Os03g49330 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os03g49330 T11088_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os03g49330.1 CCHC ZF 61 78

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

65 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AB02178.1 Alternaria brassicicola AB02178.1 N 0.000
AFLA_085050 Aspergillus flavus CADAFLAG00001284 N 0.000
ANIA_05009 Aspergillus nidulans CADANIAG00005383 N 0.000
AO090005001273 Aspergillus oryzae CADAORAG00003159 N 0.000
EAT78031.2 Phaeosphaeria nodorum EAT78031.2 N 0.000
GSTUMT00007469001 Tuber melanosporum GSTUMT00007469001 N 0.000
Pc12g15760 Penicillium chrysogenum Pc12g15760 N 0.000
PMAA_025600 Penicillium marneffei PMAA_025600 N 0.000
PTRG_03270 Pyrenophora tritici repentis PTRG_03270 N 0.000
SNOG_14491 Stagonospora nodorum SNOG_14491 N 0.000
SS1G_11879 Sclerotinia sclerotiorum SS1G_11879 N 0.000