LOC_Os05g40930 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os05g40930 T11534_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os05g40930.1 CCHC ZF 273 290

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

8 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
LOC_Os03g36290 Oryza sativa LOC_Os03g36290 N 0.889
LOC_Os03g42950 Oryza sativa LOC_Os03g42950 N 0.944
LOC_Os04g01120 Oryza sativa LOC_Os04g01120 N 1.000
LOC_Os06g21990 Oryza sativa LOC_Os06g21990 N 1.000
LOC_Os07g24690 Oryza sativa LOC_Os07g24690 N 1.000
LOC_Os11g23060 Oryza sativa LOC_Os11g23060 N 0.944
TGGT1_064600 Toxoplasma gondii TGGT1_064600 N 0.722
TGME49_121560 Toxoplasma gondii TGME49_121560 N 0.722