TGME49_121560 (Toxoplasma gondii)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 TGME49_121560 T13063_0.6 EuPathDB (2010-Sep-21)

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
TGME49_121560 CCHC ZF 696 713

Links

Other CCHC ZF family RBPs
Other Toxoplasma gondii RBPs

10 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
TGGT1_064600 Toxoplasma gondii TGGT1_064600 N 1.000
NCLIV_004350 Neospora caninum NCLIV_004350 N 0.889
LOC_Os06g21990 Oryza sativa LOC_Os06g21990 N 0.722
LOC_Os07g24690 Oryza sativa LOC_Os07g24690 N 0.722
LOC_Os05g40930 Oryza sativa LOC_Os05g40930 N 0.722
LOC_Os04g01120 Oryza sativa LOC_Os04g01120 N 0.722
fgenesh1_pg.C_scaffold_40000019 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_40000019 N 0.722
fgenesh1_pg.C_scaffold_59000001 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_59000001 N 0.722
Minc07977 Meloidogyne incognita Minc07977 N 0.722
fgenesh1_pg.C_scaffold_1000282 Cochliobolus heterostrophus C5 fgenesh1_pg.C_scaffold_1000282 N 0.722