CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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How to cite
LOC_Os08g11910
(
Oryza sativa
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
LOC_Os08g11910
T11924_0.6
Ensembl (2011-Oct-26)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
LOC_Os08g11910.1
CCHC ZF
64
81
RLCFNCFEPGHFVDKCPK
Links
Other
CCHC ZF
family RBPs
Other
Oryza sativa
RBPs
458 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Genemark.8053_g
Serpula lacrymans
Genemark.8053_g
N
0.000
PTTG_03874
Puccinia triticina
PTTG_03874
N
0.000
PTTG_08330
Puccinia triticina
PTTG_08330
N
0.000
PTTG_08777
Puccinia triticina
PTTG_08777
N
0.000