CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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PTTG_08777
(
Puccinia triticina
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
PTTG_08777
T08433_0.6
Broad (2011-Oct-27)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
PTTG_08777T0
CCHC ZF
256
273
GLCFQCGVQGHISRNCPT
Links
Other
CCHC ZF
family RBPs
Other
Puccinia triticina
RBPs
30 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
PTTG_03874
Puccinia triticina
PTTG_03874
N
1.000
PTTG_11278
Puccinia triticina
PTTG_11278
N
0.889
PTTG_10809
Puccinia triticina
PTTG_10809
N
0.889
PTTG_10713
Puccinia triticina
PTTG_10713
N
0.889
PTTG_10451
Puccinia triticina
PTTG_10451
N
0.889
PTTG_11563
Puccinia triticina
PTTG_11563
N
0.833
PTTG_08330
Puccinia triticina
PTTG_08330
N
0.833
PTTG_01306
Puccinia triticina
PTTG_01306
N
0.833
PTTG_11462
Puccinia triticina
PTTG_11462
N
0.833
PTTG_10552
Puccinia triticina
PTTG_10552
N
0.833
PTTG_11068
Puccinia triticina
PTTG_11068
N
0.833
PGTG_12646
Puccinia graminis
PGTG_12646
N
0.778
PGTG_16335
Puccinia graminis
PGTG_16335
N
0.778
PGTG_18613
Puccinia graminis
PGTG_18613
N
0.722
PGTG_20442
Puccinia graminis
PGTG_20442
N
0.722
PTTG_04497
Puccinia triticina
PTTG_04497
N
0.722
PTTG_07469
Puccinia triticina
PTTG_07469
N
0.722
PTTG_06885
Puccinia triticina
PTTG_06885
N
0.722
PTTG_08665
Puccinia triticina
PTTG_08665
N
0.722
PGTG_03348
Puccinia graminis
PGTG_03348
N
0.722
Genemark.8053_g
Serpula lacrymans
Genemark.8053_g
N
0.722
Genemark.6663_g
Serpula lacrymans
Genemark.6663_g
N
0.722
PTTG_11299
Puccinia triticina
PTTG_11299
N
0.722
PTTG_10291
Puccinia triticina
PTTG_10291
N
0.722
PGTG_03172
Puccinia graminis
PGTG_03172
N
0.722
PTTG_09789
Puccinia triticina
PTTG_09789
N
0.722
PGTG_14567
Puccinia graminis
PGTG_14567
N
0.722
PGTG_09834
Puccinia graminis
PGTG_09834
N
0.722
PGTG_05408
Puccinia graminis
PGTG_05408
N
0.722
PGTG_15116
Puccinia graminis
PGTG_15116
N
0.722