LOC_Os09g08340 (Oryza sativa)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 LOC_Os09g08340 T12095_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
LOC_Os09g08340.1 CCHC ZF 263 280

Links

Other CCHC ZF family RBPs
Other Oryza sativa RBPs

27 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
CJA05016 Caenorhabditis japonica CJA05016 N 0.000
CJA17358 Caenorhabditis japonica CJA17358 N 0.000
CJA19095 Caenorhabditis japonica CJA19095 N 0.000
Genemark.10526_g Serpula lacrymans Genemark.10526_g N 0.000
Genemark.10729_g Serpula lacrymans Genemark.10729_g N 0.000
Genemark.10975_g Serpula lacrymans Genemark.10975_g N 0.000
Genemark.3014_g Serpula lacrymans Genemark.3014_g N 0.000
Genemark.8306_g Serpula lacrymans Genemark.8306_g N 0.000
LOC_Os02g44180 Oryza sativa LOC_Os02g44180 N 0.722
LOC_Os03g44360 Oryza sativa LOC_Os03g44360 N 0.722
LOC_Os04g43950 Oryza sativa LOC_Os04g43950 N 0.722
LOC_Os06g31350 Oryza sativa LOC_Os06g31350 N 0.722
LOC_Os07g15080 Oryza sativa LOC_Os07g15080 N 0.722
LOC_Os07g17090 Oryza sativa LOC_Os07g17090 N 0.722
LOC_Os10g06430 Oryza sativa LOC_Os10g06430 N 0.722
LOC_Os11g18620 Oryza sativa LOC_Os11g18620 N 0.000
LOC_Os11g19910 Oryza sativa LOC_Os11g19910 N 0.722
LOC_Os11g38820 Oryza sativa LOC_Os11g38820 N 0.722
LOC_Os11g39950 Oryza sativa LOC_Os11g39950 N 0.722
LOC_Os12g33260 Oryza sativa LOC_Os12g33260 N 0.722
Minc08303 Meloidogyne incognita Minc08303 N 0.000
Minc15639 Meloidogyne incognita Minc15639 N 0.000
PITG_22277 Phytophthora infestans PITG_22277 N 0.000
Sb04g021900 Sorghum bicolor Sb04g021900 N 0.000