CISBP-RNA Database: Catalog of Inferred Sequence Binding Preferences of RNA binding proteins
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Minc08303
(
Meloidogyne incognita
)
CCHC ZF
RBP Information
Pfam ID
Interpro ID
Gene ID
CISBP-RNA ID
Sequence source
PF00098 (zf-CCHC)
IPR001878
Minc08303
T16120_0.6
Superfamily (2011-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No direct experiments
Motifs from related RBPs
Name/Motif ID
Species
Sequence Logo
IUPAC
Type/Study/Study ID
RBD
Identity
No RBPs with similar RNA binding domains
RNA Binding Domains
Protein ID
Domain
From
To
Sequence
Minc08303
CCHC ZF
381
398
VTCYSCRKQGHIARYCPE
Links
Other
CCHC ZF
family RBPs
Other
Meloidogyne incognita
RBPs
6 Related RBPs
Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name
Species
Gene ID
Motif Evidence
RBD
Identity
Action
Minc14969
Meloidogyne incognita
Minc14969
N
0.944
Minc15639
Meloidogyne incognita
Minc15639
N
0.944
Minc02053
Meloidogyne incognita
Minc02053
N
0.889
Genemark.8306_g
Serpula lacrymans
Genemark.8306_g
N
0.778
Minc19150
Meloidogyne incognita
Minc19150
N
0.722
Genemark.4174_g
Serpula lacrymans
Genemark.4174_g
N
0.722