PPA10881 (Pristionchus pacificus)
CCHC ZF

RBP Information

Pfam ID Interpro ID Gene ID CISBP-RNA ID Sequence source
PF00098 (zf-CCHC) IPR001878 PPA10881 T12779_0.6 Ensembl (2011-Oct-26) Link out

Directly determined binding motifs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No direct experiments

Motifs from related RBPs

Name/Motif ID Species Sequence Logo IUPAC Type/Study/Study ID RBD
Identity
No RBPs with similar RNA binding domains

RNA Binding Domains

Protein ID Domain From To Sequence
PPA10881 CCHC ZF 4 21
PPA10881 CCHC ZF 37 54
PPA10881 CCHC ZF 75 92
PPA10881 CCHC ZF 115 132
PPA10881 CCHC ZF 141 158

Links

Other CCHC ZF family RBPs
Other Pristionchus pacificus RBPs

4 Related RBPs

Due to potential differences in protein isoforms or tested constructs, some RBPs without inferred motifs might appear in this list.
Name Species Gene ID Motif Evidence RBD
Identity		 Action
AAH46576 Xenopus laevis AAH46576 I 0.000
Ame_R013633 Ailuropoda melanoleuca Ame_R013633 I 0.000
EIF2S1 Procavia capensis ENSPCAG00000002613 I 0.000
EIF2S1 Oryzias latipes ENSORLG00000011844 I 0.000
EIF2S1 Ochotona princeps ENSOPRG00000004520 I 0.000
EIF2S1 Ornithorhynchus anatinus ENSOANG00000005409 I 0.000
Eif2s1 Mus musculus ENSMUSG00000021116 I 0.000
EIF2S1 Monodelphis domestica ENSMODG00000009911 I 0.000
EIF2S1 Macaca mulatta ENSMMUG00000021419 I 0.000
EIF2S1 Pan troglodytes ENSPTRG00000006462 I 0.000
Eif2s1 Rattus norvegicus ENSRNOG00000009432 I 0.000
EIF2S1 Sorex araneus ENSSARG00000011682 I 0.000
EIF2S1 Sus scrofa ENSSSCG00000002289 I 0.000
EIF2S1 Spermophilus tridecemlineatus ENSSTOG00000001565 I 0.000
EIF2S1 Taeniopygia guttata ENSTGUG00000011542 I 0.000
EIF2S1 Tetraodon nigroviridis ENSTNIG00000012223 I 0.000
EIF2S1 Takifugu rubripes ENSTRUG00000017958 I 0.000
EIF2S1 Tursiops truncatus ENSTTRG00000015806 I 0.000
EIF2S1 Microcebus murinus ENSMICG00000010793 I 0.000
EIF2S1 Meleagris gallopavo ENSMGAG00000011974 I 0.000
EIF2S1 Loxodonta africana ENSLAFG00000013423 I 0.000
EIF2S1 Anolis carolinensis ENSACAG00000005994 I 0.000
EIF2S1 Canis familiaris ENSCAFG00000016386 I 0.000
EIF2S1 Erinaceus europaeus ENSEEUG00000010225 I 0.000
EIF2S1 Cavia porcellus ENSCPOG00000003313 I 0.000
eif2s1 Danio rerio ENSDARG00000052178 I 0.000
Eif2s1 Dipodomys ordii ENSDORG00000002382 I 0.000
EIF2S1 Homo sapiens ENSG00000134001 I 0.000
EIF2S1 Gorilla gorilla ENSGGOG00000001603 I 0.000
EIF2S1 Echinops telfairi ENSETEG00000019003 I 0.000
EIF2S1 Gasterosteus aculeatus ENSGACG00000008569 I 0.000
eif2s1l Danio rerio ENSDARG00000005827 I 0.000
ENSCHOG00000003744 Choloepus hoffmanni ENSCHOG00000003744 I 0.000
ENSCHOG00000004230 Choloepus hoffmanni ENSCHOG00000004230 I 0.000
ENSCHOG00000009030 Choloepus hoffmanni ENSCHOG00000009030 I 0.000
ENSPPYG00000005921 Pongo pygmaeus ENSPPYG00000005921 I 0.000
estExt_fgenesh1_kg.C_130002 Sporobolomyces roseus estExt_fgenesh1_kg.C_130002 I 0.000
estExt_fgenesh2_pm.C_sca_10068 Lottia gigantea estExt_fgenesh2_pm.C_sca_10068 I 0.000
estExt_Genewise1Plus.C_2350006 Capitella teleta estExt_Genewise1Plus.C_2350006 I 0.000
e_gw1.7.228.1 Trichoplax adhaerens e_gw1.7.228.1 I 0.000
IF2A_BOVIN Bos taurus ENSBTAG00000016311 I 0.000
IF2A_CHICK Gallus gallus ENSGALG00000009565 I 0.000
IF2A_RABIT Oryctolagus cuniculus ENSOCUG00000012023 I 0.000
LOC100052709 Equus caballus ENSECAG00000018424 I 0.000
LOC100399114 Callithrix jacchus ENSCJAG00000015368 I 0.000
Q7ZTK4 Xenopus laevis Q7ZTK4 I 0.000
Sjc_0067760 Schistosoma japonicum Sjc_0067760 N 0.000
Smp_093750 Schistosoma mansoni Smp_093750 N 0.000
XP_002156465.1 Hydra magnipapillata XP_002156465.1 I 0.000